Open a score conversion table in your Internet browser (see Resources). Locate the line that shows the T-score you wish to convert.
). We used PISTE to predict the binding affinities (scores) between individual T cells and one or more of the detected pHLAs, and recorded the highest score for each TCR. We then calculated the Spearman correlation between these binding scores and the rate of expansion for T cell clones. ...
The 97.5th percentiles for Z-scores in our population for men and women respectively were 3.4 and 3.9 at the lumbar spine, 1.5 and 2.1 at the femoral neck and 1.6 and 2.7 at the total hip. The 99th percentile for Z-scores for men and women respectively were 3.4 and 3.9 at the ...
To analyze the correlation of each signature with the response to immunotherapy on the OAK dataset, patients were stratified as for the TCGA-LUAD dataset. The average of the Z-scored normalized expression values from the signature genes were used as scores for the respective gene signatures. Pati...
Z scores of β values from pseudobulk analysis of Peruvian dataset compared to z scores from a, inverse-variance-weighted meta-analysis of memory T cell subsets in DICE, b, BLUEPRINT bulk eQTL analysis of naïve CD4+ T cells, c, BLUEPRINT bulk eQTL analysis of monocytes, and d, BLUEPR...
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scores.c, Top recurrently mutated genes associated with BMP-like and T-specified cell states inn = 110 ETP-ALL samples from AALL0434. Significance was assessed using a two-sided Wilcoxon rank-sum test.d,e, OS (d) and single-cell signature scores (e) amongn = 110 bulk-...
When you have fewer than n = 30 in your sample, you should use t-score calculations rather than a z-score to analyze your data. As the number n grows larger, graphs of t-scores come to approximate those of z-scores, as a higher number of points in the set statistically assures a ...
“Methods”). The final step is a dense classification layer whose output score indicates how likely the TCR is to interact with a specific pMHC. Comparing raw scores across different epitopes is challenging due to the inherent biases of each model. To make the predictions more interpretable and...
25th to the 75th percentiles of PSMA H-scores from each patient. Bar plots (on the right) summarize the frequencies of patients classified based on STEAP1 and PSMA expression as no expression (all cores with H-score ≤30, light grey), heterogeneous expression (at least one core with H-...