The architecture of composition decoder is (ConvTemplate class in cryodrgn/models.py. In this version, the default size of output volume is set to 192^3, I downsampled the intermediate activations to save some gpu memories. You can tune it as you wish, happy training!): ...
They developed a model structure based on an encoder-decoder U-Net convolutional neural network, using randomly sampled data as input and corresponding complete data as output. The training data consisted of carefully curated synthetic seismic data and real seismic data. The network was trained using...
The architecture of decoder is (ConvTemplate class in cryodrgn/models.py. In this version, the default size of output volume is set to 192^3, I downsampled the intermediate activations to save some gpu memories. You can tune it as you wish, happy training!): ...
2.3.1 GraphMVP-decoderTo precisely capture the subtle features of molecular 3D structures, we developed the GraphMVP-Decoder. The decoder initially computes the positional embedding Posemb from the drug structure representation Dstru and then integrates it to preserve spatial location information. ...
The decoder, on the other hand, provides an estimate for the data given the representation, pθ(x|z). Direct optimization of the resulting objective is intractable, however. Thus, training is done by maximizing the “evidence lower bound,” Lθ,φ(x), instead, which provides a lower ...
Ubiquitin-binding proteins: decoders of ubiquitin-mediated cellular functions Annu. Rev. Biochem., 81 (2012), pp. 291-322 CrossrefView in ScopusGoogle Scholar [8] F. Ikeda, I. Dikic Atypical ubiquitin chains: new molecular signals. ‘Protein modifications: beyond the usual suspects’ review se...
import{EncoderStream}from'cbor-x';letsendingStream=newEncoderStream();letreceivingStream=newDecoderStream();// we are just piping to our own stream, but normally you would send and// receive over some type of inter-process or network connection.sendingStream.pipe(receivingStream);sendingStream.wr...
msgpack.Encoder().on("data",ondata).encode(obj); 1000000 1763 567214 msgpack.createDecodeStream().write(buf); 1000000 2222 450045 msgpack.createEncodeStream().write(obj); 1000000 1577 634115 msgpack.Decoder().on("data",ondata).decode(buf); 1000000 2246 445235See...
msgpack.Decoder().on("data",ondata).decode(buf);10000002246445235 See thebenchmark.mdfor more benchmarks and information about benchmarking. Custom Extensions You can add your own custom extensions, which can be used to encode specific types/classes in certain ways. This is done by using the...
import{EncoderStream}from'cbor-x';letsendingStream=newEncoderStream();letreceivingStream=newDecoderStream();// we are just piping to our own stream, but normally you would send and// receive over some type of inter-process or network connection.sendingStream.pipe(receivingStream);sendingStream.wr...