Clone this github repo to some directory: git clone https://github.com/li-lab-genetics/staarpipeline-rap-batch.git This will create a folder named staarpipeline-rap-batch, you can then: Compile the source code: dx build -f staarpipeline-rap-batch the -f flag just tells DNANexus to...
library(devtools) devtools::install_github("xihaoli/STAARpipeline",ref="main") Docker Image Adocker image for STAARpipeline, including R (version 3.6.1) built with Intel MKL and all STAAR-related packages (STAAR, MultiSTAAR, SCANG, STAARpipeline, STAARpipelineSummary) pre-installed, is located...
The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVORannotator, STAARpipeline and STAARpipelineSummary - xihaoli/STAARpipeline-Tutorial
Fork5 Star9 main BranchesTags Code Folders and files Name Last commit message Last commit date Latest commit xihaoli STAARpipelineSummary v0.9.7.1 Oct 16, 2024 4b701ef·Oct 16, 2024 History 91 Commits .github/workflows R docs man .Rbuildignore ...