ssGSEA score-based Ras dependency indexes derived from gene expression data reveal potential Ras addiction mechanisms with possible clinical implicationsCancer genomicsData miningFor nearly a decade, the difficulties associated with both the determination and reproducibility of Ras-dependency indexes (RDIs) ...
In this report, we describe the application of a computational single sample gene set enrichment analysis (ssGSEA) method to derive RDIs with gene expression data. The computationally derived RDIs across the Cancer Cell Line Encyclopedia (CCLE) cell lines show excellent agreement with the ...
15.一键完成5种细胞评分分析,singscore+AddModuleScore+AUCell+ssGSEA+UCell 03:47 16.一键完成基于CellChat的细胞通讯分析,单细胞分析教程 09:28 零基础生信分析教程:R、Rstudio、Rtools的下载、安装与软件配置 生信科学家 2573 2 生信测序数据预处理教程:一行代码完成生信数据的预处理和质控 生信科学家 1494 ...
The integration of single cell rank-based gene set enrichment analysis - fix the bug of irGSEA.score(ssgsea, gsva, plage, zscore method) and a… · chuiqin/irGSEA@41fbc10
Single-sample gene set enrichment analysis (ssGSEA) analysis was utilized to calculate the cellular senescence score. WGCNA analysis was employed to ascertain... Q Bao,X Yu,X Qi - 《Environmental Toxicology》 被引量: 0发表: 2024年 APOBEC3C is a novel target for the immune treatment of lowe...
ssGSEA score-based Ras dependency indexes derived from gene expression data reveal potential Ras addiction mechanisms with possible clinical implicationsFor nearly a decade, the difficulties associated with both the determination and reproducibility of Ras-dependency indexes (RDIs) have limited their ...
METHODS. Using The Cancer Genome Atlas (TCGA) RNA-seq data (141 cases of glioblastoma), we performed comprehensive single-sample gene set enrichment analysis (ssGSEA) on gene sets from the Molecular Signatures Database (including Hallmark, Curated, and Gene Ontology). After evaluating gene sets ...