在传统MRI图像上,只是对于轴位或者矢状位进行2D的分析,比如在2D图像上的髓内病变长度(IMLL)和脑脊髓损伤中心(BASIC)评分。 Spinal Cord Toolbox (SCT) 脊髓开源分析平台相较于传统传统2D,利用3D的方法进行预测分析。目前没有研究证明...
et al. SCT: Spinal Cord Toolbox, an open-source software for processing spinal cord MRI data. Neuroimage 145, 24–43 (2017). Article PubMed Google Scholar Patterson, K. K., Gage, W. H., Brooks, D., Black, S. E. & McIlroy, W. E. Evaluation of gait symmetry after stroke: ...
suggesting that the proposed automatic tool can be used to derive relevant MRI biomarkers. \texttt{SCIsegV2} and the automatic tissue bridges computation are open-source and available in Spinal Cord Toolbox (v6.4 and above) via the \texttt{sct\_deepseg -task seg\_sc\_lesion\_t2w\_sci} ...
Spinal cord toolboxSpinocerebellar ataxias (SCAs) are a group of neurodegenerative disorders characterized by progressive ataxia. Although previous studies have focused on cerebral and cerebellar damage, spinal cord involvement in SCAs remains underexplored.This study aims to characterize spinal cord ...
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Note that the initial acroynm for model (SCT) has been changed to CAST to avoid confusion with the Spinal Cord Toolbox35, an existing open-source tool for analysing spinal cord MRI data. This architecture is applied to two tasks on separate datasets; (a) grading degenerative changes ...
ACID is an acronym forA Comprehensive Toolbox for Image Processing and Modeling of Brain, Spinal Cord, and Ex Vivo Diffusion MRI Data. The toolbox is an academic software toolkit for pre-processing of diffusion MRI data, estimation of DTI indices and spatially normalisation of DTI index maps, ...
If you have any questions or concerns, and would like to get in touch with the developers of Spinal Cord Toolbox, the best way to do so is via theSpinalcordmri.org forum. If you would like to stay up to date on spinal cord workshops and SCT announcements (new releases, hands-on cou...
spinalcordtoolbox/spinalcordtoolbox/scripts/sct_qc.py", line 125, in <module>main(sys.argv[1:])File "/Users/julien/code/spinalcordtoolbox/spinalcordtoolbox/scripts/sct_qc.py", line 108, in maingenerate_qc(fname_in1=arguments.i,File "/Users/julien/code/spinalcordtoolbox/spinalcordtoolb...
spinalcordtoolbox/spinalcordtoolbox/aggregate_slicewise.py Lines 564 to 570 ina7a3f8d # TODO: if append=True but file does not exist yet, raise warning and set append=False # write header (only if append=False) ifnotappendornotos.path.isfile(fname_out): ...