p=A@p, x= seq_along(A@x)) )## fails and you should say so: 1-indexing is FALSE:sparseMatrix(i=A@i, p=A@p, x= seq_along(A@x), index1 =FALSE)## the (i,j) pairs can be repeated, in which case the x's are summed(args <- data.frame(i = c(i,1), j = ...
I was able to installsparseMatrixStatson Debian Jessie (which comes withgccversion 4.9.2) by providing the necessary Makefile arguments withr::with_makevars(new=c(CXX14="g++",CXX14FLAGS="-g -O2 $(LTO)",CXX14PICFLAGS="-fpic",CXX14STD="-std=gnu++14"),code={BiocManager::install("spa...
include "mkl_spblas.f90" program main use mkl_spblas implicit none type(sparse_matrix_t) :: a1, a2, a12 integer :: rows, cols integer, dimension(:), allocatable :: row_indx_a1, col_indx_a1 integer, dimension(:), allocatable :: row_indx_a2, col_indx_a2 intege...
In this project, I implemented few .m functions which allow to reorder a sparse matrix read from a Matrix Market file using either the Reverse Cuthill-McKee (RCM) or Nested Dissection (ND) algorithms. - slafi/SparseMatrixReordering
If the entry test statistic has p-value less than or equal to \(p_{entry}\), update the set of equations in \(M^{(j)}\) by adding \(C^{+}x^{+}\) to its RHS. Let \(\Sigma _{\varepsilon }\) be the error covariance matrix for this, possibly new, current model \(M^{...
Functions that accept a matrix and return a scalar or constant-size vector always produce output in full storage format. For example, thesizefunction always returns a full vector, whether its input is full or sparse. Functions that accept scalars or vectors and return matrices, such aszeros,one...
Generate 2D Convolution matrix, optimized for sparse kernels. Follow 0.0 (0) 50 Downloads Updated7 Dec 2017 View License Share Open in MATLAB Online Download Overview Functions Version History Reviews(0) Discussions(0) This is designed to be a drop-in replacement for convmtx2.m. The original...
scBalance requires a single-cell RNA expression matrix M as an input, in which each column represents a gene, and each row represents a cell. To obtain a more accurate annotation result, we recommend using a filtered dataset with log transformation and normalization as the training set. Log ...
BUG: Regression inmaincreating sparse matrix from float16 raises ValueError: Output dtype not compatible with inputs.#20200 Closed ENH: sparse: Validate dtype on sparse array/matrix creation#20207 Closed perimosocordiaeclosed this asnot plannedWon't fix, can't repro, duplicate, staleMar 7, 20...
C=A*BwhereAandBare both sparse. This was the basis for the built-inC=A*Bin MATLAB, until it was superseded by GraphBLAS in MATLAB R2021a. SuiteSparseCollection for the SuiteSparse Matrix Collection waitmex waitbar for use inside a mexFunction ...