sequence, chemcal structure searches.HUMADescription: The Human Mutation Analysis (HUMA) database and...
This study aims to investigate the association of SNPs with tumor-associated latent loci. By analyzing the effect of gene mutations on the structure and function of proteins with the database, to speculate the destructive mutants. It was found that individuals with the genotype of the five key ...
sequence, chemcal structure searches.HUMADescription: The Human Mutation Analysis (HUMA) database and...
17,18. However, a recently developed approach controls for population structure using latent factors estimated considering the statistical model and the data simultaneously. This approach has been incorporated into some outlier tests (e. g. the Bayesian factor model of PCAdapt7) and GEA methods (e....
Comprehensive analysis of roles of atrial-fibrillation-related genes in lung adenocarcinoma using bioinformatic methods Tao Yan Miao Zhu Changfa Guo Medical Oncology (2022) DNRLCNN: A CNN Framework for Identifying MiRNA–Disease Associations Using Latent Feature Matrix Extraction with Positive Samples ...
Encoded genotype data produced in Excel was exported as a comma separated value (.csv) file, which was used for analysis in R versions 4.0.0 and 4.3.0 [59]. The dist.gene() function from the R package ape versions 5.4 and 5.8 was used to generate genetic distance matrices between indiv...
Encoded genotype data produced in Excel was exported as a comma separated value (.csv) file, which was used for analysis in R versions 4.0.0 and 4.3.0 [59]. The dist.gene() function from the R package ape versions 5.4 and 5.8 was used to generate genetic distance matrices between indiv...
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Principal coordinate analysis (PCoA) of the DROPS panel. The PCoA was based on the covariance matrixK_Freqestimated from the 50 K Illumina array. The genetic groups identified by ADMIXTURE (NQ = 4) are colored. Three key founders are found at extreme positions (Iodent: PH207 in red...
Then, to enlarge the training population, data from the three breeds were combined and a multi-breed analysis was performed. Accuracies of genotypes imputed using the partial least squares regression method were compared with those obtained by using the Beagle software. The impact of genotype ...