Description: atSNP ( Affinity Test for regulatory SNP detection ) is a tool for computation of a...
103]).NGS, for example, has high sensitivity for the detection of low-level mosaicism but is comparatively expensive[102,103]. DenseSNP arraysare also relatively expensive but provide the advantage of detecting a wide spectrum
Overcome technology limitations with robustcustomization toolsand streamlinedsoftware analysisfor CNV and LOH detection Agilent's high quality, oligonucleotide library synthesis (OLS) based CGH microarrays accurately detect copy number variations at the whole genome level. Unlike other SNP-based, chromosomal ...
It gives the correct detection of existing SNPs and improves the accuracy of the detection.Although the proposed method in this study is on the right direction of improving the SNP detection with SNPscanner, there is still space to enhance the function of the software. For example, the log-...
For example, detection of SNPs may be performed using a microarray with oligos chosen so that the central base is a SNP, and there are 4 oligos for each conserved surrounding sequence, each representing the SNP position filled with A, T, C, or G, respectively. If there is not a ...
3. A detection system that records and interprets the hybridization signal. To achieve relative concentration independence and minimal cross-hybridization, raw sequences and SNPs of multiple databases are scanned to design the probes. Each SNP on the array is interrogated with different probes. Depend...
High detection sensitivity for low-level mosaics The use of long 50-mer probes with high specificity to the SNP target increases sensitivity for low-level mosaics3 and offers high resolution for copy-neutral loss of heterozygosity (LOH). High 15× bead redundancy increases the signal-to-noise ra...
Hamel L, Nahar N, Poptsova MS, Zhaxybayeva O, Gogarten JP: Unsupervised learning in detection of gene transfer. J Biomed Biotechnol. 2008, 2008: 472719- Article PubMed Central CAS PubMed Google Scholar Larrañaga P, Calvo B, Santana R, Bielza C, Galdiano J, Inza I, Lozano JA,...
tool for analysis and detection of single nucleotide polymorphism (SNP) in 454 EST sequencing data...
We also use optional cookies for advertising, personalisation of content, usage analysis, and social media. By accepting optional cookies, you consent to the processing of your personal data - including transfers to third parties. Some third parties are outside of the European Economic Area, with...