SMRT Link SMRT Link software tools for PacBio HiFi sequencing systems are designed to set up and monitor sequencing runs, review performance metrics, analyze, visualize, and annotate sequencing data. SMRT Link is available for both local installation and cloud access, offering flexibility to work ...
Installation of SMRT Link server software is discussed in the document SMRT Link software installation guide (v12.0). New features, fixed issues and known issues are listed in the document SMRT Link release notes (v12.0). When you first start SMRT Link, you must specify which system you are...
~/software/smrttools/smrtcmds/bin/ 在这里路径下调用命令 然后你会发现,还是没有pbmerge 后来谷歌到 pbmerge属于pbbam 后面我发现pacbio的工具可以通过conda安装 所以只要使用 conda Install pbbam 就可以使用pbmerge了
SMRT(Single-Molecule Real-Time)测序即单分子实时测序。变合成边测序的过程中,携带修饰的碱基所发出的荧光信号滞留时间有所差异,通过检测信号脉冲的长短即可区分普通碱基和携带修饰的碱基。 得到比对结果bam文件后,利用SMRTlink自带的的ipdSummary软件进行甲基化位点的检测。 部分来源: https://www.jianshu.com/p/8ca...
一、SMRT Link分析操作步骤 1. 进入SMRT Link：打开google浏览器---输入192.168.1.30:9090---按Enter键进 入界面---点击open---点击继续浏览---输入账号（admin）和密码（admin）。2. 数据分析：点击SMRT Analysis（New Analysis）---在Available Data Sets中勾选需要分析的样本cell---勾选后点击---...
SMRTLINKHOLDINGSSDNBHD目前是世马联精密工业(乐山)有限公司直接控股股东,持股比例为100%;目前SMRTLINKHOLDINGSSDNBHD投资世马联精密工业(乐山)有限公司最终收益股份为100%;二、SMRTLINKHOLDINGSSDNBHD的商业合作伙伴:基于公开数据展示,SMRTLINKHOLDINGSSDNBHD目前有8个商业合作伙伴,包括CHOONGTHONGFAI、FOGWEEKAG、SIMKUALI...
SMRT Link Troubleshooting Guide (v6.0.0) image.png contos没有iptables,可能是个原因,试一下 可以试一下 检查是否安装了iptables service iptables status 参考解决方案: 虚拟机新装了一个CentOs7,然后做防火墙配置的时候找不到iptables文件,解决方法如下: ...
SMRT Link is the web-based end-to-end workflow manager for the Sequel™ System. It includes software applications for setting up samples, designing and monitoring sequencing runs, and analyzing and managing sequence data. Additionally, SMRT Link provides support for multiple instruments. SMRT Link...
./smrtlink_8.0.0.80529.run --rootdir ~/apps/smrtlink 安装程序检查是否具备软件安装条件 内存不小于64GB CPU核心数不少于32 ulimit -n不小于8192 ulimit -u 不小于8192 PacBio SMRT Link Installer (smrtlink-release_8.0.0.80529) --- Part 0 of 10: System Prerequisite Check --- Checking...
SMRT link软件使用手册评分: smrtlink软件是pacbio官方分析工具,里面包含了常用模块的使用方法和参数介绍。 pacbio smrtlink2018-06-07 上传大小:4.00MB 所需:36积分/C币 SMRT_Link_User_Guide_v10.1.pdf SMRT_Link_User_Guide_v10.1.pdf 上传者:Oli_Oli时间:2021-09-27 ...