https://yanglab.westlake.edu.cn/software/smr/#SMRlocusplot19yanglab.westlake.edu.cn/software/smr/#SMRlocusplot19 when you want to plot the locus for a specific gene/methylation sites using SMR resluts, you need to analysis the target probe SMR result and generate a file that can be...
他的优点应该是最初仅试用于做eqtl或者pqtl和疾病的因果关系的吧,这方面的数据生态做的还不错。 Datasource部分 如果仅做双样本MR,请尽快离开! 网页链接及参数详情 SMR | Yang Lab (westlake.edu.cn)
③mQTL来源于两组外周血BSGS和LBC队列研究(https://yanglab.westlake.edu.cn/software/smr/#mQTLsummarydata) ④抑郁症的结局GWAS数据来源于PGC官网(https://pgc.unc.edu/for-researchers/download-results/) (2)下载安装SMR https://yanglab.westlake.edu.cn/software/smr/#Download (3)创建SMR分析用的文件夹...
To generate the loucs omics plot with extracted file, please see the omics SMR plot page (https://yanglab.westlake.edu.cn/software/smr/#OmicsSMRplot). We also provide anR scirptto plot the omics SMR plot as presented in Wu et al.. Please see the demo plot below. ...
这个问题是GWAS 的数值计算后有0存在，导致取-log的时候出现了-Inf值，最后y轴无法计算。源代码中' p...