SIMD C/C++ library for massive optimal sequence alignment (local/SW, infix, overlap, global) - GitHub - Martinsos/opal: SIMD C/C++ library for massive optimal sequence alignment (local/SW, infix, overlap, global)
To use the library as a CMake dependency in your project, please seetests/installation_tests/from_fetchfor an example. Since ICU is so common and popular, we assume that you may have it already on your system. When it is not found, it is simply omitted from the benchmarks. Thus, to...
There're versions which subtract instead of adding, flip sign of the product before adding. There're even versions which alternately add or subtract, computing ( a • b ) + c for even lanes ( a • b ) -c for odd ones, or doing the opposite. It was probably added for complex nu...
首先用户需要激活SDK（添加头文件CPATH, LIBRARY, LD_LIBRARY）添加 math intrinsic 头文化后， 就可以...
Marth, SSW library: an SIMD Smith- Waterman C/C++ library for use in... M Zhao,WP Lee,E Garrison,... 被引量: 0发表: 2012年 SWAPHI: Smith-Waterman Protein Database Search on Xeon Phi Coprocessors The maximal sensitivity of the Smith-Waterman (SW) algorithm has enabled its wide use ...
library is shown in Figure 1. This example can be compiled to generate LLVM Vector IR and binary for coreavx512. namespacestdsimd=std::experimental;voidsimd_memcpy(stdsimd::native_simd<float>x,stdsimd::native_simd<float>y,void*p){autocmp=x<y;memcpy(p,&cmp,cmp.size()*4);} ...
Ordering clones from a genomic library into physical maps of whole chromosomes presents a central computational problem in genetics. Chromosome reconstruct... SM Bhandarkar,S Chirravuri,J Arnold - 《Journal of Computational Biology A Journal of Computational Molecular Cell Biology》 被引量: 13发表: ...
已经有可用的 SVE2 高度优化的库,例如Arm Compute Library。Arm Compute Library 提供优于其他开源替代方案的卓越性能,并立即支持 SVE2。 (2)支持 SVE2 的编译器 C/C++ 编译器从 C/C++ 循环生成 SVE2 代码。要生成 SVE2 代码,请为 SVE2 功能选择适当的编译器选项。例如,对于 armclang,启用 SVE2 优化的一...
This section describes the C/C++ language-level features supporting the Streaming SIMD Extensions 2 (SSE2) instructions:Floating-Point Intrinsics Using Streaming SIMD Extensions 2 Instructions that describe the intrinsic operations for the double-precision, floating-point data type (__m128d). Integer ...
This section describes the C/C++ language-level features supporting the Streaming SIMD Extensions 2 (SSE2) instructions:Floating-Point Intrinsics Using Streaming SIMD Extensions 2 Instructions that describe the intrinsic operations for the double-precision, floating-point data type (__m128d). Integer ...