1.2 格式转换与信息统计SeqKit的转换功能强大,如 fa2fa命令可快速将FASTQ转换为FASTA,而 fx2tab则可以统计碱基含量、长度、ID等信息。通过 stat和 stats命令,你可以分析序列长度分布、四分位数、N50等统计数据。1.3 从ID提取序列和motif定位SeqKit的 grep命令允许你根据ID、正则表达式或特定模式精准提...
statsSimple statistics: #seqs, min/max_len, N50, Q20%, Q30%…FASTA/Q✓ subseqGet subsequences by region/gtf/bed, including flanking sequencesFASTA/Q+ or/and - slidingExtract subsequences in sliding windowsFASTA/Q+ only faidxCreate the FASTA index file and extract subsequences (with more ...