tax reference number. Should you not have your tax reference number, you can go to thewww.sars.gov.zawebsite and click on contact us and select request your tax number under the send us a query heading. You'll need to enter your current contact details, ID number and a landline ...
We can useesearchto query the number of sequences associated with the term "coronavirus". There were 41,874 results as of 2020/03/01. esearch -db nuccore -query coronavirus<ENTREZ_DIRECT><Db>nuccore</Db><WebEnv>NCID_1_121026101_130.14.22.33_9001_1583054896_904858778_0MetA0_S_MegaStore...
There is non-overlap of virus taxid in the training and test sets. The number of viral genomes for each host category and each viral taxon is summarized in Supplementary Table S8. Two groups of short fragments of two types of length ranges were generated: Group A, 100–400 bp; Group B...
SARS-CoV-2/SARS-CoV-infected proteome/PTM DIA MS data Spectronaut version 14 (Biognosys)64was used to generate the libraries and analyse all DIA files using the human fasta file (UniprotKB, release 2019.10) and sequences of SARS-CoV-2/SARS-CoV proteins (UniProt, release 2020.08). Orf1a pol...
Protein-sol server was used to predict the solubility of the vaccine construct. Figure6demonstrated that the solubility of the vaccine construct in terms of QuerySol (scaled solubility value) was 0.571. The experimental dataset (PopAvrSol) had a population average of 0.45. Accordingly the solubilit...
We used the same parameters as our previous study, which are optimized for short query sequences.58 Briefly, -task, -qcov_hsp_perc, -num_alignments, -evalue were set to blastp-short, 99, 109 and 2 × 109, respectively. To construct the blastp database, we retrieved all genome ...
However, the lowest Expect (E) value of the protein BLAST hits, which represents the number of similar hits expected by chance given the size of the database used and the length of the query (Tatusova and Madden, 1999), is 7.5. This suggests that all the hits shown in Table S2 could...