r71website for the LPS dataset analysis (https://doi.org/10.6084/m9.figshare.8986193Supplementary File 3). All aggregation and DS analysis methods are provided in themuscatR package, which is available athttps://www.bioconductor.org/packages/muscatthrough the open-source Bioconductor project....
Fig. 6: Correlation matrix for colon carcinoma signatures. Spearman correlation coefficients between colon carcinoma signatures were calculated using only landmark genes (A) and all restored genes (B). The colon carcinoma signature (PandaOmics CRC project signature) was derived from the “expression a...
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This approach would not only allow a dynamic and adaptive prioritization mechanism, but it would also yield to a direct and explicit cooperation between Supervised and Reinforcement Learning frameworks.Data availibility Project page and source codes are available at: https://csanadlb.github.io/sl_...
For example to find all mRNA fastq files originating from CD34+ cells (restricted to the PCBC project, syn1773109), we use a Synapse query from one of the clients. For example, from the command line client (which comes with the Python client): synapse query "select * from syn7511263 ...
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and M.B.; supervision, G.J.G.R.; project administration, G.J.G.R. Funding No external funding was used to support this research. Acknowledgments We gratefully acknowledge our patients for allowing us to use their samples in this study. The authors acknowledge M.A.E.M. Wagenmakers, E....