Salt-responsive GRNs, constructed on the basis of the temporal transcriptional patterns in the two species, share common trans-regulators but exhibit an evolutionary divergence in cis-regulatory sequences and in the overall network sizes. In both species, WRKY-family transcription factors and their ...
To better understand the evolutionary interrelatedness among these HcSWEET members, we constructed a phylogenetic tree containing SWEETs from six species (Hemerocallis citrina,Hemerocallis fulva,Oryza sativa,Zea mays,Arabidopsis thaliana,Vitis vinifera) based on amino acid sequences using the TBtools softwa...
Use TBtools, click on “Others”, then select “MEME Suite Wrapper”, and finally choose “Simple MEME Wrapper”. Upload protein sequences from StPLs and set the output path. The number of motifs to find is set to 6, and the maximum E-value is set to 0.0001. The mode selection is ...
the production of glycyrrhizic acid and flavonoids. These results provide systematic evolutionary and functional information on theGuCPKgene family, and establish the foundation for further understanding of theGuCPKsroles in promoting the biosynthesis of medicinal ingredients of glycyrrhizic acid and ...
With the purpose of better understanding the similarity and diversity of the ABCGs, the conserved motifs of ABCG proteins were investigated (Figure 2). The MEME online tool (http://meme-suite.org/, accessed on 15 March 2024) was used to predict the conserved motif compositions. Motif predict...
Salinity is one of the major environment factors that limits crops productivity worldwide [1]. It is estimated that approximately 20% of cultivated land and one half of irrigated land worldwide suffers salinity damage [2]. Salt stress has a vital effect on the growth and development of plants...