An easy, scalable, and microfluidics-free workflow makes single-cell RNA-Seq (scRNA-Seq) accessible for more labs View kit Selection Tools Library Prep & Array Kit Selector DesignStudio Custom Assay Designer TruSight Oncology 500 Product Selector NGS Workflow Finder All Selection & Planning To...
RNA-seq Workflows and ToolsStephen, Turner
Obtaining samples with high cell viability can be difficult for many experiments but is necessary for success on the 10x Genomics® Chromium™ platform. This tech note describes how GENEWIZ scientists used optimized single-cell workflows, including dead cell removal, to overcome low viability and ...
Twist announced the launch of a portfolio of RNA sequencing tools, which includes the Twist RNA Exome, Twist RNA Library Prep Kit and the Twist Ribosomal RNA (rRNA) & Hemoglobin (Globin)...
IDT’s xGen NGS RNA-seq library preparation provides high-quality transcriptomics data and fast workflows to help you make the next discovery.
workflowbioinformaticsrna-seqpipelineworkflow-managementbioinformatics-workflows UpdatedOct 27, 2021 Python Single-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or SmartSeq, offering a variety of aligners and empty-droplet detection ...
interest. Zymo Research’sQuick-RNA kitsandDirect-zol RNA kitscan produce DNA-free RNA of high quality that is suitable for RNA-Seq workflows. Please see our blog“Evaluating Quality of Input RNA for NGS Library Preparation”for more information and tips to obtain RNA for use in RNA-Seq ...
Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis 比较系统的对比了当年流行的workflows。希望能有点帮助。 发布于 2019-11-21 12:02 赞同32 条评论 分享收藏喜欢收起...
WORKFLOWS AND PIPELINES 35 2.5 HARDWARE REQUIREMENTS 35 2.6 FOLLOWING THE EXAMPLES IN THE BOOK 36 2.6.1 Using Command Line Tools and R 36 2.6.2 Using the Chipster Software 37 2.6.3 Example Data Sets 39 2.7 SUMMARY 40 REFERENCES 40 CHAPTER 3 ◾ Quality Control and Preprocessing 41 3.1 ...
The size distribution normalization module is implemented using the LongSummarizeSizeDistributions and LongCreateReferenceSizeDistribution workflows. First, using the LongSummarizeSizeDistributionsworkflow, a full-length, UMI-deduplicated cDNA size distribution is obtained from the valid_3p_valid_5p barcoded ...