(2006). RMD: a rice mutant database for functional analysis of the rice genome . Nucleic Acids Res . 34 , D745–D748 10.1093/nar/gkj016 [ Cross Ref ]Zhang J, Li C, Wu C, Xiong L, Chen G, et al. RMD: a rice mutant database for functional analysis of the rice genome. ...
By connecting the annotations to other rice genomics data, such as full-length cDNAs and Tos17 mutant lines, the RAP-DB serves as a hub for rice genomics. All of the resources can be accessed through http://rapdb.lab.nig.ac.jp/. 展开 关键词: RAP-DB ...
Na+, Li+, Fe2+, Zn2+and Co2+sensitivity of K667 mutant. In order to further validate the metal transport properties in another yeast mutant, we choose theS. cerevisiae mid1mutant. TheMID1gene is nonessential for vegetative growth. Generally,mid1mutant cells grow normally in a medium havin...
In this study, we have used the d1 (rga1) mutant, which was identified earlier41. We confirmed the down-regulation ofRGA1transcript in therga1mutant (Fig.S1). Microarray data analysis under MIAME compliant conditions using a fold change cut-off value of ± 1.0 (geometric mean log2) alo...
sequencesimilarity,flankingsequencesofmutantlines,transposableelements,etc.OtherannotationdatasuchasGnomoncanbedisplayedalongwiththoseofRAPforcomparison.Wehavealsodevelopedanewkeywordsearchsystemtoallowtheusertoaccessusefulinformation.TheRAP-DBisavailableat:http://rapdb.dna.affrc.go.jp/andhttp://rapdb.lab.nig....
evaluated the different parameters for testing the genetic diversity and utility of core collection, using 50526 accessions of Chinese landrace rice germplasm registered in national genebank and 24 core collections selected from the accessions by different methods, with 26 characters as the database. The...
. Three IR64 mutant lines viz; M-IR-180, M-IR-49, and M-IR-175 had more than 26 mg kg−1Zn in polished rice as against 16 mg kg−1in IR64. These mutants can be used as a donor in Zn breeding programs and are also a valuable resource for understanding the genetic mechanism...
(R) genes,Xa23is an executorRgene, conferring broad-spectrum disease resistance to all naturally occurring biotypes ofXoo. In this study, CBB23, a rice line carryingXa23gene, was inoculated with wild PXO99Aand its mutant, P99M2, to retrieve the differentially expressed genes (DEGs). RNA-...
Intact RNA-seq datasets were deposited in the NCBI Gene Expression Omnibus (GEO) under accession numberGSE168650. The Rice SNP-Seek Database is accessible athttps://snp-seek.irri.org/; the EnsemblPlants database is accessible athttp://plants.ensembl.org/index.html.Source dataare provided with...
The CCAAT-box sequence CCGTTG was substituted by CCGaaa (mutant probe1) and CaaaaG (mutant probe2) in the mutant probe. GST-YB7, fusion protein GST-OsNF-YB7; GST, negative control. (C) Expression levels of OsMIR5810 in OsNF-YB7 overexpressing rice (YB7-ox). U6 was used as miRNA...