5) were based on cellranger count results. Alignments of single-pollen RNA sequences to genome and deduplication To identify genotyping markers in the R. breviuscula gametes, scRNA reads of the pollen nuclei were first mapped to the haplotype 1 chromosomes (Fig. 2b) using hisat2 (v.2.1.0...
expect conliga to detect these large alterations below 2% without increasing the number of reads per sample. as we discuss below, under certain conditions, conliga may be able to detect highly focal amplifications below 1%. by modelling the loci counts with an appropriate parametric count ...
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(2n = 34), which is part of the Rosaceae family, is among the most significant genera in terms of species count. The genus Crataegus, commonly referred to as hawthorn, is a small shrub or tree [30]. Christensen [10] noted that Crataegus is the largest genus within the Maloideae ...