DNASTAR - Illumina Reference Guided Genome Assembly凯锐达(珠海)科技有限公司总代理 凯锐达公司 21 0 DNASTAR - Lasergene Genomics Suite Overview Webinar凯锐达(珠海)科技有限公司总代理 凯锐达公司 9 0 DNASTAR - Advanced SNP Analysis in Lasergene Genomics Suite Webinar凯锐达(珠海)科技有限公司 凯锐达公司...
A Multireference-Based Whole Genome Assembly for the Obligate Ant-Following Antbird, Rhegmatorhina melanosticta (Thamnophilidae)doi:10.3390/D11090144Laís A. CoelhoLukas J. MusherJoel CracraftMultidisciplinary Digital Publishing Institute
有关 ALT contigs 的目的和用法的更多讨论,请参阅 人类基因组参考build 文件。 初级组装(Primary assembly) 是指 (i) 组装的染色体,(ii) 未定位(已知属于特定染色体但顺序或方向未知)和 (iii) 未放置(染色体未知)序列的集合。它代表一个非冗余的单倍体基因组。 PAR 代表 拟常染色体区域(pseudoautosomal region)...
The draft genome assemblies were then corrected by using ~650 Gb of cleaned Illumina paired-end reads, resulting in a total assembly size of 10.76 Gb, 99.06% of which was arranged into 21 chromosomes (based on 1,296 Gb of Hi-C data) after dissociating 72 misjoined contigs into ...
usage: rebaler [-h] [-t THREADS] [--keep] reference reads Rebaler: reference-based long read assemblies of bacterial genomes positional arguments: reference FASTA file of reference assembly reads FASTA/FASTQ file of long reads optional arguments: -h, --help show this help message and exit ...
Reference assisted chromosome assembly of 30 Saccharomyces cerevisiae strains from Saccharomyces genome database Genomic regions annotated as amplified or deleted in each of the genomes. (XLS) EA Radchenko,GS Tamazian,PV Dobrynin - Bgrsb 被引量: 0发表: 2014年 A sequence-based genetic linkage map ...
Here, we present a chromosome﹍evel genome assembly of passion fruit by incorporating PacBio long HiFi reads and Hi〤 technology. The assembled reference genome is 1.28 Gb size with a scaffold N50 of 126.4 Mb and 99.22% sequences anchored onto nine pseudochromosomes. This genome is highly ...
Here we present Merqury, a novel tool for reference-free assembly evaluation based on efficient k-mer set operations. By comparing k-mers in a de novo assembly to those found in unassembled high-accuracy reads, Merqury estimates base-level accuracy and completeness. For trios, Merqury can ...
Pea is an important plant-based protein source for human food and animal feed. This reference genome provides a foundation to elucidatePisumevolution. ThePisumcommon ancestor was probably cytogenetically likeP. s. elatius, this taxon evolved across the Mediterranean and Middle East40,52and gave rise...
Data from the 1000 genomes project (1KGP) and Complete Genomics (CG) have dramatically increased the numbers of known genetic variants and challenge several assumptions about the reference genome and its uses in both clinical and research settings. Specifically, 34% of published array-based GWAS st...