Top panel shows carrier frequency over time for each song bout, with relative amplitude highlighted according to the heatmap on the right. Note the substantial frequency variation between small-wing song phrases, which is not present in long-wing song. Bottom panel shows the song structure with ...
Supplemental Table4A). The gut microbiota of the 2- and 7-day untreated controls were clustered together, distinct from the 2- and 7-day treatment groups, as shown in the heatmap (Fig.3B). Using principal component analysis based on taxonomic composition...
Figure 1 Map of field collection sites In this study, we examined wild A. mexicanus fish from the independent Texas introduction, which were captured and maintained in our lab (hereafter referred to as wild). We explored whether there are comparable shifts in behavioral and morphological traits...
We hypothesized that microbial community composition would be different between the early and late successional sites and that total growth would be greater at the late-successional site compared to the early successional site due to greater biomass and plant interactions at the former. Because many A...
Changes in the distribution of lymphocytes and myeloid cells and LN structure due to abx and tacrolimus. Mice given abx (6 days) with or without 2 days of tacrolimus. Representative qualitative heatmaps of IHC marker changes relative to untreated control (red = increased; blue = decre...
This continued in an iterative process of revisions over the course of a year, with additional refinement based on feedback from a December 2023 conference presentation and peer review of the manuscript. We finalized the PARRQA framework with the goal of supporting planning and evaluating of 1) ...
aDistribution map of lineages and sub-lineages based on strains used in this study.bRedundancy Analysis plot with constrained predicators.cStrain distributions lineages/ and sub-lineages per relevant environmental parameters (significances (pvalues) of the Dunn test correspond to: *p < 0.05; ...
Additional custom Python scripts were used to plot the frequency of mutations at each base (distribution plots) and to map the frequency of each type of substitution (heatmaps). The number of substitutions per read was calculated and visualized using a custom Python script that processed the MD...
vulgaris A Zhou et al High-throughput genome-wide mutagenesis strate- gies, such as transposon saturation mutagenesis or homologous recombination, allow us to map genes to their functional traits on a genome-wide scale (Garst et al., 2013). Despite the widespread application of these approaches,...
For the first challenge, we chose to randomly pick a limited set of reads from a metagenomic sample and map them to nt. We ran this process multiple times to identify taxonomic nodes that are hit in the majority of the iterations. For the second challenge, we chose to use a pre-...