Codon-specific Ramachandran plots and their comparative analysis could serve as a useful, quantitative tool in future studies looking at the association between coding and local protein structure. It is likely that codon-specific backbone dihedral angle distributions will show even more significant variati...
The Ramachandran plot is a fundamental tool in the analysis of protein structures. Of the 4 basic types of Ramachandran plots, the interactions that determine the generic and proline Ramachandran plots are well understood. The interactions of the glycine and pre-proline Ramachandran plots are not....
The online investigation tool proposed by Jamie Al-Nasir (http://personal.rhul.ac.uk) was used for manipulation and plotting of the Ramachandran plot. According to the analysis, the finalized Ramachandran plot is shown in Figure 1. From the plot, it can be seen that there are few portions...
The Ramachandran plot is a fundamental tool in the analysis of protein structures. Of the 4 basic types of Ramachandran plots, the interactions that determ... B Robert,BK Ho - 《Bmc Structural Biology》 被引量: 221发表: 2005年 Ramachandran-type plots for glycosidic linkages: Examples from mol...
Ramachandran plot shown here was generated by PROCHECK [54]. (Note that "similarity search" is more typically termed as "alignment search"; however, considering that SARST is designed as a search method rather than an alignment tool, we will use the former term throughout this report to ...
TheRamachandranplotisafundamentaltoolintheanalysisofproteinstructures. Ofthe4basictypesofRamachandranplots,theinteractionsthatdeterminethegenericandproline Ramachandranplotsarewellunderstood.Theinteractionsoftheglycineandpre-proline Ramachandranplotsarenot. Results:Inglycine,theψangleistypicallyclusteredatψ=180°andψ...
The Ramachandran plot shown here was generated by PROCHECK [54]. (Note that "similarity search" is more typically termed as "alignment search"; however, considering that SARST is designed as a search method rather than an alignment tool, we will use the former term throughout this report ...