Country Code spaceTrack.COUNTRY_CODE string The country code. Launch Date spaceTrack.LAUNCH_DATE string The launch date SITE spaceTrack.SITE string The site. Decay Date spaceTrack.DECAY_DATE string The decay date. Decayed spaceTrack.DECAYED integer The decayed number. File spaceTrack.FILE integer...
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CODE_OF_CONDUCT.md added label option back Jan 14, 2022 DESCRIPTION fixing docs and dependencies Jul 3, 2024 Makefile added label option back Jan 14, 2022 NAMESPACE got master into dev Jan 24, 2022 README.Rmd adding more to the workflow ...
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2.读取bam文件(pysam.AlignmentFile) bam是sam的二进制文件,因其占用空间少,所以都会使用bam进行存储和操作。 要读取bam文件,必须先创建一个AlignmentFile对象. for lineinsamfile: print(line) break 但顺序读取还不够灵活,我们有时需要随机读取(提示:sam不能随机读取),pysam的fetch方法提供了随机读取功能. ...
Bam files for each data set were merged and converted into a CIT file using the GEDI toolkit34 and then processed using GRAND-SLAM (version 2.0.7; for the NXF1 data set, GRAND-SLAM 2.0.5 g was used) with parameters “-trim5p 15 -modelall” to generate read counts and NTR values...
BaM 1.0.1 https://cran.r-project.org/web/packages/BaM/index.html BAS 1.4.9 https://cran.r-project.org/web/packages/BAS/index.html base 3.4.4 NA base2grob 0.0.2 https://cran.r-project.org/web/packages/base2grob/index.html base64 2.0 https://cran.r-project.org/web/packages/base...
R interface to megadepth: BigWig and BAM related utilities lieberinstitute.github.io/megadepth Topics rstatsbigwigbamrecount2megadepthrecount3daspter Resources Readme Code of conduct Code of conduct Citation Cite this repository Activity Custom properties ...
s protocol. Reads from the sequencer were attributed to each of the four patients usingDemuxlet34at default settings. For each library, the corresponding genotyping data (VCF file) and scRNA-seq data (BAM file) were imported intoDemuxletin order to infer the sample source for each cell ...
peaksat is an R package (https://www.r-project.org/) for the evaluation of ChIP-seq and other sequence-enrichment assays (see code availability section for full details). The package provides functions to support two primary tasks: 1) iteratively subsampling aligned bam files and calling MAC...