SoftwareQTL Ici Mapping is freely available public software capable of building high-density linkage maps and mapping quantitative trait loci(QTL) in biparental populations. Eight functionalities are integrated in this software package:(1) BIN: binning of redundant markers;(2) MAP: construction of ...
QTL IciMapping is freely available public software capable of building high-density linkage maps and mapping quantitative trait loci (QTL) in biparental populations. Eight functionalities are integrated in this software package: (1) BIN: binning of redundant markers; (2) MAP: construction of linkage...
QTLs were identified with the inclusive composite interval mapping (ICIM) algorithm for additive gene effects implemented in QTL IciMapping v.3.2 software. The QTL expressed in each environment were defined, as well as set of QTL which were stable across all the environments. For both procedures,...
利用粳稻(O. sativa subsp. japonica)品种 TD70 和籼稻(O. sativa subsp. indica)品种 Kasalath 衍生的重组自交系群体(RILs)为研究材料, 构建了基于深度重测序的高密度 Bin 遗传图谱, 以幼 苗存活率为指标, 使用 QTL IciMappingv 软件完备复合区间作图法对控制水稻苗期高温胁迫下的幼苗存活 率进行 QTLs 分析....
Meng L, Li H, Zhang L, Wang J (2015) QTL IciMapping: integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populations. The Crop Journal 3(3):269–283. https://doi.org/10.1016/j.cj.2015.01.001 Article Google Scholar Mesterházy Á,...
IciMapping V4.1 software was used for individual environment QTL analysis, and the mean value for each line in each environment and the BLUP dataset were calculated [34]. The software program was run by the inclusive composite interval mapping addition (ICIM-ADD) model using the default ...
The QTL analysis was performed by composite interval mapping with QTL IciMapping v4.0.6.0 software (Meng et al. 2015). LOD threshold of 7.2 was used to confirm the presence of putative SSR markers associated with bakanae disease resistance. The percentage of trait variation explained by a QTL...
QTL IciMapping: Integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populations. The Crop Journal, 2015, 3(3): 269-283. [28] OOIJEN J, VAN'T VERLAAT J W, TOL J, DALÉN J, BUREN J, MEER J M, KRIEKEN J V, KESSEL J, VAN O,...
Combined with this genetic map, a main-effect and epistatic QTL mapping were performed. At the same time, QTL IciMapping software was used to map the distribution of QTL loci on wheat chromosomes. The QTLs are named after “Q + trait name + processing time + chromosome”. The GCIM method...
QTL IciMapping: integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populations Crop J., 3 (2015), pp. 269-283 View PDFView articleView in ScopusGoogle Scholar [29] H. Li, J.-M. Ribaut, Z. Li, J. Wang Inclusive composite interval ma...