SoftwareQTL Ici Mapping is freely available public software capable of building high-density linkage maps and mapping quantitative trait loci(QTL) in biparental populations. Eight functionalities are integrated in this software package:(1) BIN: binning of redundant markers;(2) MAP: construction of ...
QTL IciMapping is freely available public software capable of building high-density linkage maps and mapping quantitative trait loci (QTL) in biparental populations. Eight functionalities are integrated in this software package: (1) BIN: binning of redundant markers; (2) MAP: construction of linkage...
QTL IciMapping is freely-available public software, capable of building high-density genetic linkage maps and mapping quantitative trait loci (QTL). The latest released version has the following new features compared with previous versions. (1) Dominant/recessive markers are considered in recombination...
QTLs were identified with the inclusive composite interval mapping (ICIM) algorithm for additive gene effects implemented in QTL IciMapping v.3.2 software. The QTL expressed in each environment were defined, as well as set of QTL which were stable across all the environments. For both procedures,...
QTL IciMapping: integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populations Crop J., 3 (2015), pp. 269-283 View PDFView articleView in ScopusGoogle Scholar [29] H. Li, J.-M. Ribaut, Z. Li, J. Wang Inclusive composite interval ma...
Using Manager QTXb20 and Icimapping 3.2 software, some APR QTLs were mapped in Zhoumai 22/Chinese Spring wheat population. Three QTLs of APR to LR detected and designated QLr.zh-2BS, QLr.zh-4BL and QLr.zh-7DS) explained 12.58–13.58%, 7.02–20.22% and 6.73–21.30% of the phenotypic ...
In this study, QTL mapping and candidate gene mining of seed size and seed weight were performed in populations F2, BC1, S1-1 and S1-2 with composite interval mapping (CIM), inclusive composite interval mapping (ICIM) and marker enrichment strategy. It is expected to facilitate the castor hi...
IciMapping V4.1 software was used for individual environment QTL analysis, and the mean value for each line in each environment and the BLUP dataset were calculated [34]. The software program was run by the inclusive composite interval mapping addition (ICIM-ADD) model using the default ...
In order to identify environment-stable QTL, interactions between QTL and environments were performed by the Multi-Environment Trials (MET) functionality in QTL IciMapping software (V4.1) [30,31], at a walking step of 1 cM and with a LOD threshold of 2.5 as manual input. 2.5. Alignment...
利用粳稻(O. sativa subsp. japonica)品种 TD70 和籼稻(O. sativa subsp. indica)品种 Kasalath 衍生的重组自交系群体(RILs)为研究材料, 构建了基于深度重测序的高密度 Bin 遗传图谱, 以幼 苗存活率为指标, 使用 QTL IciMappingv 软件完备复合区间作图法对控制水稻苗期高温胁迫下的幼苗存活 率进行 QTLs 分析....