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Our World in Data (2020). Lurie, N., Saville, M., Hatchett, R. & Halton, J. Developing Covid-19 vaccines at pandemic speed. N. Engl. J. Med. 382, 1969–1973 (2020). Article CAS PubMed Google Scholar Gordon, D. E. et al. A SARS-CoV-2 protein interaction map reveals ...
AlphaFoldDB AlphaFoldDB is a database of protein structure predictions produced by DeepMind's AlphaFold system. It provides highly accurate predictions of protein 3D structures PDBbind PDBbind is a comprehensive collection of the binding data of all types of biomolecular complexes in the PDB database...
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34 This ion influx in turn depolarizes the cell and initiates nerve impulses.35,36 Table 9.1. Binding data for OBPs SpeciesOBPAccession numberLigandKd/μMAssayConcentration/μMpHRef OBPLigandReporter Apis mellifera L. ASP2 AF166497 2-isobutyl-3-methoxypyrazine (IBMP) Kd1: 0.24Kd2: 0.21Kd3...
s integrated protein database containing information for >2 million proteins across 186 species. Learn more about a protein’s sequence, structure, functions, domains and more. And if you need recombinant protein for your experiments, you can get aninstant quote online, directly from our database...
In most standard proteomics workflows, these modifications are not routinely included in the database search, and we were wondering whether this affects the ratio of histone MS signal to total MS signal, which is critical for our scaling approach. To address this question, we searched the data ...
PYTHONPATH="." python scripts/data/make_splits.py For infilling-based sampling, our scripts expect space separated sequences with "[MASK]" denoting the infilling locations. An example can be found in thetest infill seed file. Basic Usage ...
High-dimensional genomic and proteomic data are now commonplace in cancer research. This Review aims to help biologists understand the properties of high-dimensional data spaces and how these affect our ability to derive meaningful information from the d
These results show therefore how our method can be used to quickly screen for potential interfaces with an accuracy comparable to AlphaFold-multimer. To further showcase the quality of the predictions in real-world applications, we tested proteins from the Protein-Protein Docking Benchmark 5.038 (...