NCBI, aligned usingClustal Omega, and curated with trimAl. Analysis was carried out in MEGA 7.0 using the Maximum Likelihood method with the WAG+G+I model and 1000 bootstrap replicates. Clade I and II: smut fungal PR-1Ls; Clade III: Plant PR-1s; IV: yeast. KbKalmanozyma brasiliensis, ...
(NCBI accession number XP_006696593.1) is missing 29 conserved amino acids in the first ZZ domain. Inspecting the gene sequence and annotation revealed that the 87-bp coding sequence of these 29 amino acids ends with a stop codon (TAG) and is currently annotated as an intron (intron 2). ...
1、一步一步教你使用 NCBI查找DNA、mRNA、cDNA、Protein、promoter 、弓 I物设计、BLAST序列比对等最近看到很多战友在论坛上询问如何查询基因序列、如何进行引物设计、如何使用BLAST进行序列比对,这些问题在 NCBI上都可以方便的找到答案。现在我就结合我 自己使用NCBI的一些经历(经验)跟大家交流一下BCBI的使用。希望大家...
delete carbohydrate attachment sites are often introduced because crystals could not be obtained without these modifications. In addition to a PDB code, crystal structures have an accession number in the NCBI database. The accession number does not appear on the PDB website but can be found on ...
SNPs data of humanNPHS1gene, SNP ID and protein accession number of nephrin, were obtained from NCBI dbSNP (http://www.ncbi.nlm.nih.gov/snp) and used for further computational analysis. 2.1. Evaluation of damaging effect of nsSNPs inNPHS1gene ...
The sequences of the two herpesviruses were downloaded from the VOCs database [22] and the NCBI database [23, 40, 41]. Accession numbers: Genomes: KSHV: Human herpesvirus 8 strain cell line BC-1 (VOCs genome ID 890); VZV: Human herpesvirus 3 strain Oka parental (VOCs genome ID 921)...
Table 2 Names and NCBI accession numbers of proteins identified in differentially expressed spots Full size table Annotation and ontology The horse genome, though sequenced, is only partially annotated. Therefore, the human orthologs were used to identify gene function and overrepresented gene ontologies...
Sequence data are available at NCBI (https://www.ncbi.nlm.nih.gov) with accession numbers: MK629705 and QFG71781. Acknowledgments The study was supported by CSIR-Young Scientist project (YSP-02/2016-17). R.K.J. is recipient of Research Fellowship from DST INSPIRE, Govt. of India. Autho...
The sequencing data were deposited in the National Center for Biotechnology Information (NCBI) under BioProject accession number: PRJNA780247 (BioSample ID SAMN28162086). Conflicts of Interest The authors declare that the research was conducted in the absence of any commercial or financial relationships...
NCBI: National Center for Biotechnology Information PA26: proteasome activator protein with a molecular mass of 26-kDa PGF: prostaglandin F RNA: ribonucleic acid SP: secretome TMHMM: transmembrane protein topology with a Hidden Markov Model TCTP: translationally controlled tumor protein TIRSP...