install.packages("optparse") install.packages("ggVennDiagram") install.packages("BiocManager")BiocManager::install("DESeq2")BiocManager::install("limma")BiocManager::install("edgeR")BiocManager::install("tximport")BiocManager::install("clusterProfiler")BiocManager::install("org.Hs.eg.db")BiocManager::i...
install_args.append('--user')return install_args def _parse_args():"""Parse the command line for options"""parser = optparse.OptionParser() parser.add_option('--user', dest='user_install', action='store_true', default=False, help='install in user site package (requires Python 2.6 or...
install.packages("BiocManager") # 获取已安装包 a = rownames(installed.packages()) install_package <- c("RColorBrewer", "gplots", "agricolae","optparse") # 判断包是否存在,不存在则安装 for (i in install_package) { if (!i %in% a) BiocManager::install(i, update = F) } 如果是Github...
install.packages("BiocManager") # 获取已安装包 a = rownames(installed.packages()) install_package <- c("RColorBrewer", "gplots", "agricolae","optparse") # 判断包是否存在,不存在则安装 for (i in install_package) { if (!i %in% a) BiocManager::install(i, update = F) } 1. 2. 3....
optparse.py", line 1387, in parse_args stop = self._process_args(largs, rargs, values) File "/usr/local/Cellar/python@3.8/3.8.6_1/Frameworks/Python.framework/Versions/3.8/lib/python3.8/optparse.py", line 1427, in _process_args self._process_long_opt(rargs, values) File "/usr/local...
return install_args def _parse_args(): """ Parse the command line for options """ parser = optparse.OptionParser() parser.add_option( '--user', dest='user_install', action='store_true', default=False, help='install in user site package (requires Python 2.6 or later)') ...
# 安装BiocManagerif(!requireNamespace("BiocManager",quietly=TRUE))install.packages("BiocManager")# 获取已安装包a=rownames(installed.packages())install_package<-c("RColorBrewer","gplots","agricolae","optparse")# 判断包是否存在,不存在则安装for(i in install_package){if(!i%in%a)BiocManager::insta...
user_install: if sys.version_info < (2, 6): log.warn("--user requires Python 2.6 or later") raise SystemExit(1) install_args.append('--user') return install_args def _parse_args(): """ Parse the command line for options """ parser = optparse.OptionParser() parser.add_option( ...
from pip._internal.wheel_builder import build, should_build_for_install_command if MYPY_CHECK_RUNNING: from optparse import Values from typing import Iterable, List, Optional from pip._internal.models.format_control import FormatControl
@@ -232,17 +232,13 @@ def pip_self_version_check(session: PipSession, options: optparse.Values) -> Non if not installed_dist: return try: upgrade_prompt = _self_version_check_logic( state=SelfCheckState(cache_dir=options.cache_dir), current_time=datetime.datetime.now(datetime.timezone....