The Pear Genomics Database (PGDB, http://pyrusgdb.sdau.edu.cn) is an online data analysis and query resource that integrates comprehensive multi-omics data for pear. This database is equipped with user-friendly interactive functional modules and data visualization tools, and constitutes a convenien...
Interestingly, we detect increased DNA methylation in the promoters of most genes within the database during pear flesh development. Application of a DNA methylation inhibitor to the developing fruit represses chlorophyll degradation in the pericarp and promotes xanthophyll, 尾-carotene, and abscisic ...
PearMODB: a multiomics database for pear (Pyrus) genomics, genetics and breeding study. Database 2023. 2023;baad050. Babu PR, Rao KV, Reddy VD. Structural organization and classification of cytochrome P450 genes in flax (Linum usitatissimum L.). Gene. 2013; 513(1):156–162. Kumar MS,...
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In this study, a multiomics strategy was adopted to mine the essential genes regulating chilling-induced endodormancy release. We first assembled a high-quality genome of the low-CR pear cultivar 'Cuiguan', which is a popular cultivar in South China. Using this reference genome, we performed ...
(HTs)accelerate senescence.However,the molecular mechanism by which temperature affects senescence is unclear.Herein,through multiomics analyses of fruits subjected to postharvest HT,LT,and room temperature treatments,a total of 56 metabolic compounds and 700 mRNAs were identified to be associated with ...
A multi-omics data analysis tool, OmicsBean (http://www.omicsbean.cn), which integrated GO enrichment and KEGG pathway analysis, was employed to analyse the obtained differentially expressed proteins [34]. Analysis of protein-protein interaction was based on the String (http://string.embl.de/)...
(WGCNA) revealed that nine candidate TCA (tricarboxylic acid)-related DEGs and three acid transporter-related DEGs were located in three key modules. The regulatory networks of the above candidate genes were also predicted. By integrating pear resequencing data, two domestication-related genes were ...