文档标题《Pathway Bioinformatics Database, Software, and Discovery[生物信息学途径数据库,软件和发现]》,总页数为50页,主要介绍了与Pathway Bioinformatics Database, Software, and Discovery[生物信息学途径数据库,软件和发现]相关的资料,希望对大家有用,欢迎大家浏览!
We also describe the computational tools that utilize PANTHER Pathway information to analyze gene expression experimental data. 展开 关键词: Pathway database ontology systems biology bioinformatics evolution protein classification gene expression analysis DOI: 10.1007/978-1-60761-175-2_7 ...
Cyclone objects can also be stored in a relational database CycloneDB. Queries can be written in SQL, and in an intuitive and concise object-oriented query language, Hibernate Query Language (HQL). In addition, Cyclone interfaces easily with Java software including the Eclipse IDE for HQL ...
It is one main database of KEGG , which was built in 1995, and is a bioinformatics resource as part of the research projects of the Kanehisa Laboratories in the Bioinformatics Center of Kyoto University and the Human Genome Center of the University of Tokyo. KEGG PATHWAY contains our ...
bioinformaticspathwaydatabaseAbstract: Network representations of biological pathways offer a functional view of molecular biology that is different from and complementary to sequence, expression, and structure databases. There is currently available a wide range of digital collections of pathway data, ...
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K Choi,K Sun - 《Bmc Bioinformatics》 被引量: 11发表: 2008年 Resuscitation with Valproic Acid Alters Inflammatory Genes in a Porcine Model of Combined Traumatic Brain Injury and Hemorrhagic Shock. Parametric Gene Set Enrichment Analysis (PGSEA), and DAVID (Database for Annotation, Visualization,...
Assessing functional associations between an experimentally derived gene or protein set of interest and a database of known gene/protein sets is a common t... Enrico,Glaab,Ana?s,... - 《Bioinformatics》 被引量: 221发表: 2012年 Gene set enrichment meta-learning analysis: next- generation sequ...
BMC Bioinformatics (2024) A unified model for interpretable latent embedding of multi-sample, multi-condition single-cell data Ariel Madrigal Tianyuan Lu Hamed S. Najafabadi Nature Communications (2024) Advances in cancer DNA methylation analysis with methPLIER: use of non-negative matrix factorizat...
Molecular Signatures Database (MSigDB)数据库中就包含了超过17,000个这样的基因集分布在8大类别中(如:H: hallmark gene sets、C1: positional gene sets、C2:curated gene sets、C3 : motif gene sets、C4 : computational gene sets、C5 : GO gene sets、C6 : oncogenic signatures、C7 : immunologic signatur...