Cell:Pan-genome analysis of 33 genetically diverse rice accessions reveals hidden genomic variations Koishi 2 人赞同了该文章 学校毕设任务之一,翻译文献。翻译了一小部分以后觉得这篇文章的细节对毕设方向帮助不大,外加太长了(30页+),决定换一篇。把半成品放在这,或许能为同行提供一些帮助。 (论文原文可以直接...
By association analysis, we found that E.coli strains in non-human hosts may more easily utilize foreign genetic materials to adapt to their surroundings, but the population in human hosts has higher demands for the control of population density, indicating that highly accurate quorum-sensing ...
Zhao Q, Feng Q, Lu H, Li Y, Wang A, Tian Q, Zhan Q, Lu Y, Zhang L, Huang T. Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice. Nat Genet. 2018;50(2):278.Zhao Q, Feng Q, Lu HY, et al. Pan-genome analysis highlights the extent of...
We have performed a pan-genome analysis on the core gene data of multiple Bacillus species to investigate the Bacillus species in food microbiome. Our findings provide a comprehensive genetic landscape of the Bacillus species, which is also consistent with previous studies on a limited number of ...
Pan-genome analysis is a standard procedure to decipher genome heterogeneity and diversification of bacterial species. Specie evolution is traced by defining and comparing the core (conserved), accessory (dispensable) and unique (strain-specific) gene pool with other strains of interest. Here, we pre...
Zhao Q, Feng Q, Lu H, et al (2018) Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice. Nat Genet 50:278–284.https://doi.org/10.1038/s41588-018-0041-z 本篇与9#pan-genome#rice#同年发表,可对照学习。
Pan-Genome Analysis of Human Gastric Pathogen H. pylori: Comparative Genomics and Pathogenomics Approaches to Identify Regions Associated with Pathogenicity and Prediction of Potential Core Therapeutic Targets Pan-genome analysis of human gastric pathogen H. pylori: comparative genomics and pathogenomics ...
Since PGAP (pan-genome analysis pipeline) was published in 2012, it has been widely employed in bacterial genomics research. Though PGAP has integrated several modules for pan-genomics analysis, how to properly and effectively interpret and visualize the results data is still a challenge. To well...
High-order chromatin structure plays important roles in gene regulation. However, the diversity of the three-dimensional (3D) genome across plant accessions are seldom reported. Here, we perform the pan-3D genome analysis using Hi-C sequencing data from
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