cowplot: Useful add-on for ggplot2. No need to load each one with its own call. LoadingbruceRis enough. Main functions inbruceR Basic use and analyses (e.g., correlation matrix with plot) Print(),Describe(),Freq(),Corr(), ... ...
In most tables, species are identified by SpecCode (as per best practices) rather than scientific names. Multiple tables can be joined on the SpecCode to more fully describe a species. To filter species by taxonomic names, use the taxa table from load_taxa(), which provides a joined table...
插入section header的方法：按下快捷键“Ctrl+Shift+R”,Rstudio会弹出弹窗输入段落标题内容：输入想要插...
此主题的部分內容可能由机器或 AI 翻译。 消除警报 Prefix.h rx.h Rxce.h Rxcontx.h Rxlog.h Rxprocs.h Rxstruc.h Rxtimer.h Rxworkq.h Scavengr.h Wdm.h 下载PDF 使用英语阅读 保存 添加到集合 添加到计划 通过 Facebookx.com 共享LinkedIn电子邮件 ...
We describe the full procedure to set up ideal on a server and document the required steps in the GitHub repository https://github.com/federicomarini/ideal_serveredition, which can be particularly useful for bioinformaticians or IT-system administrators. Following this approach, a publicly available...
Additionally, we investigated the suitability of a linear regression model to describe the linear portion of the peak saturation curve. The resulting linear models fit the saturation profiles with an adjusted R2 value around 90% (Table S1). In contrast to the meta-pools, none of the individual...
In this paper we describe flexible competing risks regression models using the comp.risk() function available in the timereg package for R based on Scheike et al. (2008). Regression models are specified for the transition probabilities, that is the cumulative incidence in the competing risks set...
Below, we describe the methods we developed for this and that are all implemented in grandR. For differential gene expression, grandR interfaces with DESeq223 and the lfc package24. P-values and log fold changes can be estimated in a straight-forward manner for a single pairwise comparison...
Published studies and postmarketing reports describe maternal NSAID use at about 20 weeks gestation or later in pregnancy associated with fetal renal dysfunction leading to oligohydramnios, and in some cases, neonatal renal impairment. These adverse outcomes are seen, on average, after days to weeks...
We describe three new features, implemented in estimateR to improve the method described by Huisman et al. [18] in the face of these issues. Handling truncated incidence data In some outbreaks, the window for which incidence data is available excludes the beginning of the outbreak. This may ...