Error in library(e1071) : there is no package called ‘e1071’ 网上有些说是包没有装全,需要安装依赖包 , dependencies=TRUE, 但通常这个依旧解决不了问题。 其实大多数情况下R都安装在windows平台,所以我们应该想到是不是文件的执行权限问题。 当我们用管理员身份运行R工具时,就会发现上面的问题消失啦! PS...
Error in library(e1071) : there is no package called ‘e1071’ 网上有些说是包没有装全,需要安装依赖包 , dependencies=TRUE, 但通常这个依旧解决不了问题。 其实大多数情况下R都安装在windows平台,所以我们应该想到是不是文件的执行权限问题。 当我们用管理员身份运行R工具时,就会发现上面的问题消失啦! PS...
+'tibble',+'dplyr',+'stringr',+'ggplot2',+'ggpubr',+'factoextra',+'FactoMineR',+'pheatmap',+"survival",+"survminer",+"patchwork",+"ggstatsplot",+"ggplotify",+"cowplot",+"glmnet",+"ROCR",+"caret",+"randomForest",+"survminer",+"Hmisc...
Augment and automate methods to ensure statistical comparability (e.g. across coefficients of different linear estimators), sensible default settings, necessary transformations (e.g. standardizing features when required), automatic hyperparameter optimization, etc. tidyfit builds on the tidymodels suite, ...
1.1 TOmicsVis Shinyapp 1.1.1 Local start funcion: #Start shiny application.TOmicsVis::tomicsvis() TOmicsVis Shinyapp 1.1.2 Online cloud platform:https://shiny.hiplot.cn/tomicsvis-shiny/ 1.2 Github and CRAN Install 1.2.1 Install required packages from Bioconductor: ...
It is required to pass a model function and a predict function. Further, it is possible to pass a preprocessing function and a list of hyperparameter values to test with grid search. You can check the requirements for these functions at ?cross_validate_fn. SVM Let’s cross-validate a supp...
#> It is helpful to set up a constiuent abbreviation, enter a unique id #> three or four characters should work something like tn or tp or NO3). #> Even if you don't feel you need an abbreviation you need to enter something (no quotes): #> #> Required concentration units are mg...
‘AcidSingleCell’ 0.1.8 is being loaded, but >= 0.1.9 is required Error: package ‘basejump’ could not be loaded Execution halted ' returned non-zero exit status 1. Traceback (most recent call last): File "/home/user/bcbio-nextgen/anaconda/bin/bcbio_nextgen.py", line 245, in <...
Also, when performing clustering with SC3 or monocle, the data used to create the required objects to run these pipelines is the same data that was previously filtered, normalized, and scaled using Seurat’s pipeline. 5. Differential Expression Following clustering, DE analysis can be conducted ...
Website: https://benben-miao.github.io/TOmicsVis/ 1.2 Github and CRAN Install New!!! TOmicsVis Shinyapp: # Start shiny application. TOmicsVis::tomicsvis() TOmicsVis Shinyapp 1.2.1 Install required packages from Bioconductor: # Install required packages from Bioconductor install.packages("...