We demonstrate that the pipeline provides efficient cancer classification of whole slide cytology images, improving over previous results both in terms of accuracy and feasibility. The complete source code is made available as open source (https://github.com/MIDA-group/OralScreen)....
The extraction, sorting, and parsing code was custom-developed using Jupyter notebook and Pandas on top of Python 3.9, the code can be found at (https://github.com/kunalchawlaa/TCGA-Oral-Cancer). Reference for the codes developed was accessed from, https://labs.cd2h.org/gitforager/...
Human Oral Virome Database: https://github.com/RChGO/OVD IMG/VR Viral Resources: https://img.jgi.doe.gov/cgi-bin/vr/main.cgi Supplementary information Supplementary Information Glossary 16S rRNA gene amplicon sequencing A microbiome sequencing technique whereby the variable region or regions of 16...
Holger and Xu, Daguang and Blaschko, Matthew B. and Decherchi, Sergio and Cavalli, Andrea and Yuille, Alan L. and Zhou, Zongwei}, journal={Conference on Neural Information Processing Systems}, year={2024}, utl={https://github.com/MrGiovanni/Touchstone} } @article{qu2023abdomenatlas, titl...
Microbiome analyses of blood and tissues suggest cancer diagnostic approach. Nature. 2020;579(7800):567–74. https://doi.org/10.1038/s41586-020-2095-1. Article CAS PubMed PubMed Central Google Scholar Savage N. The complex relationship between drugs and the microbiome. Nature. 2020;577(7792...
Prevention and treatment of metastatic breast cancer (BC) is an unmet clinical need. The retinoic acid derivative fenretinide (FeR) was previously evaluated in Phase I-III clinical trials but, despite its excellent tolerability and antitumor activity in preclinical models, showed limited therapeutic ...
Python: Please refer to the work of ACMMM2021https://github.com/plemeri/UACANet 3.3 Pre-computed maps: They can be found inGoogle Drive Link (61.6MB). 4. Citation Please cite our paper if you find the work useful: @inproceedings{fan2020pranet, title={Pranet: Parallel reverse attention ...
Python: Please refer to the work of ACMMM2021https://github.com/plemeri/UACANet 3.3 Pre-computed maps: They can be found indownload link. 4. Citation Please cite our paper if you find the work useful: @article{fan2020pra, title={PraNet: Parallel Reverse Attention Network for Polyp Segmen...
Computer-aided diagnosis has been slow to develop in the field of oral ulcers. One of the major reasons for this is the lack of publicly available datasets. However, oral ulcers have cancerous lesions and their mortality rate is high. The ability to reco
Alterations in colorectal cancer virome and its persistence after surgery Si Xian Ho Jia-Hao Law Ker-Kan Tan Scientific Reports (2024) The fecal and oropharyngeal eukaryotic viromes of healthy infants during the first year of life are personal Xaira Rivera-Gutiérrez Patricia Morán Carlos F...