This chapter introduces open source tools for mass spectrometry (MS)-based metabolomics. The tools used include the R language for statistical computing, mzMine and KNIME. A typical MS-metabolomics data set is used for illustration and the tasks of visualisation, peak detection, peak identification...
OpenMS is a flexible, user-friendly, open-source software platform for the biological analysis of mass spectrometry proteomics and metabolomics data. The modular platform allows developers to seamlessly generate custom data-analysis workflows and directl
摘要: A major update to the mass spectrometry imaging (MSI) software MSiReader is presented, offering a multitude of newly added features critical to MSI analyses. MSiReader is a free, open-source, and...关键词: Mass spectrometry imaging Mass spectrometry software Data analysis Image processing ...
OpenChrom has been designed to become an extensible cross-platform open source software for the mass spectrometric analysis of chromatographic data. It provides extension points to enable built-in import capabilities for binary or textual instrument vendors' data formats. In addition to its custom XML...
Mass-Suite (MSS) is a Python-based, open-source software package designed to analyze high-resolution mass spectrometry (HRMS)-based non-targeted analysis (NTA) data, particularly for water quality assessment and other environmental applications. MSS prov
jqcML is released as open-source software under the permissive Apache 2.0 license and can be downloaded from https://bitbucket.org/proteinspector/jqcml . 展开 关键词: mass spectrometry proteomics quality control qcML Java API open source XML qcDB database ...
PI: An open-source software package for validation of the SEQUEST result and visualization of mass spectrum Abstract Background Tandem mass spectrometry (MS/MS) has emerged as the leading method for high- throughput protein identification in proteomics. Recent technological breakthroughs have dramatically...
SOFTWAREOpenAccess PI:Anopen-sourcesoftwarepackagefor validationoftheSEQUESTresultand visualizationofmassspectrum YantaoQiao 1 ,HongZhang 2 ,DongboBu 1 andShiweiSun 1* Abstract Background:Tandemmassspectrometry(MS/MS)hasemergedastheleadingmethodforhigh-throughput proteinidentificationinproteomics.Recenttechnologica...
MAVEN, an open-source software program for analysis of LC-MS metabolomics data, was originally released in 2010. As mass spectrometry has advanced in the intervening years, MAVEN has been periodically updated to reflect this advancement. This manuscript
An open-source python library for mass spectrometry-based proteomics data analysis - hollenstein/maspy