doi:10.1002/0471650129.dob0538Jaap HeringaJohn Wiley & Sons, Inc.J. Heringa. Phylogenetic tree (phylogenetic reconstruction, phylogeny, phylogeny reconstruction). In Dictionary of Bioinformatics and Computational Biology. John Wiley & Sons, Inc., Oct 2004....
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The simulation study shows this method can select better trees among the potential candidates, which can provide a useful way in phylogenetic tree selection.doi:10.1080/02664763.2011.610442Wang[WangHY[WangHung[WangSL[WangSheffield PolytechnicJ APPL STATWang, H.; Hung, S.L. Phylogenetic tree ...
Interactive Tree Of Life (http://itol.embl.de) is a web-based tool for the display, manipulation and annotation of phylogenetic trees. It is freely available and open to everyone. In addition to classical tree viewer functions, iTOL offers many novel ways of annotating trees with various addi...
2. Using a comprehensive multitrophic dataset of arthropods and fungi from a species-rich subtropical forest, we tested whether tree species richness or tree phylogenetic diversity relates to the diversity and composition of organisms. 3. We show that tree phylogenetic diversity but not tree species ...
R2R3-MYBs can be classified into subgroups based on phylogenetic relationships and short signature motifs that are conserved within and unique to each subgroup (Kranz et al., 1998; Dubos et al., 2010). The anthocyanin-activating R2R3-MYBs in most flowering plants belong to subgroup 6, ...
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Super snazzy online phylogenetic tree viewer with automatic customization using simple, tab-separated text files. - mooreryan/iroki
This ranges from the phylogenetic distribution and relevance of bacterial genome projects, breakdown of projects by sequencing centers or the yearly growth of sequencing projects by organism domain. The charts and pre-computed graphs on this page are updated every week to ensure that users have ...
One tool may be the database “tree-attribute viewer.” This tool displays a protein family phylogenetic tree together with a table containing sequence-level annotations for each sequence in the family (mostly derived from SwissProt and GenBank). Each of the fields of the table has one or ...