python test_chemistry_charmm.py Traceback (most recent call last): File "test_chemistry_charmm.py", line 4, in <module> from chemistry.utils.six import iteritems File "/home/magnolia/python/lib/python2.7/site-packages/chemistry/__init__...
mski1776:abl choderaj$ python process-pdbfixer-output.py Traceback (most recent call last): File "process-pdbfixer-output.py", line 17, in <module> modeller.addHydrogens(pH) File "/Users/choderaj/miniconda/lib/python2.7/site-packages/simtk/openmm/app/modeller.py", line 805, in addHydrog...