However, the decision if a motif combination represents an NLR protein was entirely manual.The NLR-parser pipeline is designed to use the MAST output from six-frame translated amino acid sequences and filters for predefined biologically curated motif compositions. Input reads can be derived from, ...
Files main ChopSequence.jar NLR-Annotator.jar NLR-Parser3.jar README.md meme.xml src.zipBreadcrumbs NLR-Annotator / NLR-Parser3.jar Latest commit Wulff-Lab Add files via upload 4759f0b· Oct 2, 2020 HistoryHistory File metadata and controls Code Blame 49.3 KB Raw View raw...
Hi, I wanted to try the program NLR-parser however I get an error when I try running it: Exception in thread "main" java.lang.IllegalStateException: No match found at java.base/java.util.regex.Matcher.group(Matcher.java:645) at coreClass...
However, the decision if a motif combination represents an NLR protein was entirely manual.Results: The NLR-parser pipeline is designed to use the MAST output from six-frame translated amino acid sequences and filters for predefined biologically curated motif compositions. Input reads can be derived...
NLR-parser: rapid annotation of plant NLR complements. 2015. NLR-parser: Rapid annotation of plant NLR complements. Bioinformatics 31:1665-1667.Steuernagel B, Jupe F, Witek K, Jones JDG, Wulff BBH. 2015... Burkhard,Steuernagel,Florian,... - 《Bioinformatics》 被引量: 34发表: 2015年研究...