Plant breeding has been beneficial in developing improved varieties using conventional tools, techniques and methodologies. The availability of NGS tools and online resources is leading to a gene revolution of plant breeding, as they facilitate the study of the genome and its relationship with the ...
To install these tools just run: To run the tests: % make test Executables are built into each tool directory in the repository. If you wish to clean all binaries and intermediate files: % make clean To get the latest version of ngsTools package: ...
Accelerate Focused NGS Applications with New Sequencing Tools Single sequencer. Multiple applications. Now more scalable than ever. Yes, with the Ion GeneStudio S5 Series flexible chip format, your research accelerates across both small and large projects withou...
参考文献: Sandra MP, Marta R, Xavier FC, et al. Characterisation of the sewage virome: comparison of NGS tools and occurrence of significant pathogens[J]. Science of the Total Environment, 2020, APR 15. Doi: 10.1016/j.scitotenv.2020.136604. 文中病毒组研究方法: 本研究重点比较了用于检测城市...
输出结果经过RTG Tools和真集比对计算Precision和Recall。 在区分度较大的5%变异丰度数据集中,我们可以看到,TNscope和Mutect2 (和TNhaplotyper2结果一致) 在SNP和Indel检测上都大幅度领先其他软件,尤其是TNscope能够在基本杜绝假阳性的基础上达到较高的灵敏度。
Sandra MP, Marta R, Xavier FC, et al. Characterisation of the sewage virome: comparison of NGS tools and occurrence of significant pathogens[J]. Science of the Total Environment, 2020, APR 15. Doi: 10.1016/j.scitotenv.2020.136604.
Open-Source Bioinformatics Tools Next-generation sequencing for beginners Curious about using NGS in your research? Learn the basics of next-generation sequencing and find tips for getting started. Learn about NGS Training Illumina Resources & Tools NGS for Beginners Genomics Education Illumina NGS...
Code Issues Pull requests Tools for working with genomic and high throughput sequencing data. bioinformatics scala genomics ngs umi analyzing-genomic-data fgbio molecular-indexes Updated Mar 20, 2025 Scala samtools / htsjdk Star 285 Code Issues Pull requests Discussions A Java API for high-thro...
ClinGen提供了变异的剂量敏感性,有助于辨别突变的显隐性异常模式。更重要的是ClinGen结合临床、遗传模式、人群、功能证据及专家评审,根据ACMG/AMP指南对变异进行致病性分类,结果保存在ClinVar中。实验室和临床医生也可以使用ClinGen的”variant curation tools”来**评估尚未经过专家审查的变异致病性的证据。
ClinGen提供了变异的剂量敏感性,有助于辨别突变的显隐性异常模式。更重要的是ClinGen结合临床、遗传模式、人群、功能证据及专家评审,根据ACMG/AMP指南对变异进行致病性分类,结果保存在ClinVar中。实验室和临床医生也可以使用ClinGen的”variant curation tools”来**评估尚未经过专家审查的变异致病性的证据。