nx.average_clustering(G=G) 0.5833333333333334 1.连通度 1.1 检查图是否连通 1.2 检查有向图是否为强连通 1.3 点连通度、边连通度: 2.网络效率 2.1全局效率 2.2 局部效率 2.2.1 查找子图 2.2.3 局部效率源码分析 3.聚类系数(Clustering Coefficient) 3.1 聚类系统源码分析 __EOF__ 本文作者: sheyueyu...
# 计算社交网络的聚类系数 clustering_coefficient = nx.clustering(G) print("社交网络的聚类系数:", clustering_coefficient) 2. 生物网络分析 生物网络涉及到蛋白质相互作用、基因调控网络等,可以使用 NetworkX 来分析生物网络中的结构和功能。 import networkx as nx # 创建一个简单的生物网络图 G = nx.Graph(...
6.聚类系数(Clustering Coefficient) 聚类系数量化了图中节点趋于聚类的程度。它反映了一个节点的两个邻居也是彼此邻居的可能性。 节点中心度衡量的重点是节点在整个网络中的重要性或影响力,而聚类系数则不同,它能让我们深入了解节点周围的局部结构。 考虑蛋白质相互作用网络中的三种蛋白质:A、B 和 C。 蛋白质 A ...
average_shortest_path_length(G) print('diameter: ', diameter_g, '\n', 'local_efficiency: ', local_efficiency, '\n', 'global_efficiency: ', global_efficiency, '\n', 'average_shortest_path_length: ', average_shortest_path_length, ) 3 clustering efficient # clustering = np.mean(list...
networkx.algorithms.node_classification.lgc.local_and_global_consistency networkx.algorithms.shortest_paths.unweighted.single_source_shortest_path networkx.algorithms.shortest_paths.unweighted.single_source_shortest_path_length networkx.algorithms.shortest_paths.unweighted.single_target_shortest_path networkx.algorith...
global_efficiency Eulerian is_eulerian eulerian_circuit eulerize Maximum Flow Edmonds-Karp Shortest Augmenting Path Preflow-Push Dinitz Boykov-Kolmogorov Gomory-Hu Tree Utils Network Simplex Capacity Scaling Minimum Cost Flow weisfeiler_lehman_graph_hash ...
defdescribe(G, ny_tri, chems):globaldescribeNetwork''' Describe the network: degrees, clustering, and centrality measures '''# Degree# The number of connections a node has to other nodes.degrees= nx.degree(G) degrees_df = pd.DataFrame(degrees.items(), columns=['Facility','Degrees']) ...
dict of graph theory results the keys are the names of the datasets the values are another dict containing 'L' - the average shortest path length 'CC' - the average clustering coefficient 'DD' - the degree histogram 'Nodes' - the number of nodes in the graph 'Edges' - the number of ...
Average value of \(C_{i}\) for all i is referred as the clustering coefficient for whole graph: $$\begin{aligned} C_i=\frac{2E_i}{k_i(k_i-1)}. \end{aligned}$$ (3) In the case of network analysis, different parameters can be analyzed. In this case, global and local ...
NetworkX是一个用Python编写的库,专门用于创建、操作和研究复杂网络的结构、动态和功能。它提供了简单易用的接口来处理图论和网络结构。NetworkX适用于处理大型网络结构,并提供了许多内置的图算法,如路径寻找、图的构建和修改、节点属性操作等。 NetworkX官方文档(网站):https://networkx.org/; ...