在癌症研究领域中,研究人员已经开始意识到数据分享的重要性,尤其是临床试验的相关信息、伴随临床试验的相关分子、基因层面的信息,NCI Genomic Data Commons便是为了解决这个问题而产生的工具,主要是由芝加哥大学、Ontario Institute for Cancer Research、Leidos Biomedical Research,在NCI补助下,所建置的共享癌症研究数据的云...
library(GenomicDataCommons) Check basic functionality status()#> $commit#> [1] "4dd3680528a19ed33cfc83c7d049426c97bb903b"#>#> $data_release#> [1] "Data Release 34.0 - July 27, 2022"#>#> $status#> [1] "OK"#>#> $tag#> [1] "3.0.0"#>#> $version#> [1] 1 ...
Provide R access to the NCI Genomic Data Commons portal. data-sciencebioinformaticsrgenomicscancertcgaapi-clientcore-servicesbioconductorvignettenci UpdatedAug 27, 2024 R jmsolano/denstoolkit Sponsor Star10 Code Issues Pull requests DensToolKit is a suite of programs for analyzing the molecular electron...
The goal of the National Cancer Institute’s (NCI’s) Genomic Data Commons (GDC) is to provide the cancer research community with a data repository of uniformly processed genomic and associated clinical data that enables data sharing and collaborative analysis in the support of precision medicine....
After controlled-access to one or more datasets has been granted, logging into the GDC web portal will allow you toaccess a GDC authentication token, which can be downloaded and then used to access available controlled-access data via the GenomicDataCommons package. ...
CellMiner: A web-based suite of genomic and pharmacologic tools to explore transcript and drug patterns in the NCI-60 cell line set. Cancer Res. 2012, 72, 3499–3511. [Google Scholar] [CrossRef] [PubMed] [Green Version] Luna, A.; Elloumi, F.; Varma, S.; Wang, Y.; Rajapakse, V...