Select language Download Expand all | Collapse all Details Version: V 1.1 Date Published: 5/12/2016 File Name: NCBI Blast on Windows Azure_V1.1.zip File Size: 62.5 MB A parallel BLAST engine that runs on the Windows Azure cloud fabric, NCBI BLAST on Windows Azure can scale up to hundred...
输入命令cd .\软件\ncbi-blast-2.9.0+-win64\bin\,按回车键,目的是找到程序位置。 构建数据库 输入命令 .\makeblastdb.exe -in C:\Users\wanglab1\Desktop\pepunit.lib -dbtype prot -out lailai 按回车,目的是构建数据库。 makeblastdb.exe表示运行程序; -in表示输入; pepunit.lib表示下载好的比对数...
首先将mirna.fasta放到C:\software\NCBI\blast-2.6.0+文件夹下,然后调出MS-DOS命令行,转到C:\software\NCBI\blast-2.6.0+文件夹下运行以下命令: # 自己构建的数据库blastn.exe-task blastn-query mirna.fasta-dbBd_scaffold_2014-outout.txt -task 后面选择你所要用的程序,blastn,blatp,tblastx 等; -quer...
ftp://ftp.ncbi.nih.gov/blast/db 本地BLAST数据库下载地址 1. General Introduction NCBI BLAST home pages (http://www.ncbi.nih.gov/BLAST/) use a standard set of BLAST databases for Nucleotide, Protein, and Translated BLAST searches. These databases are made available in the /blas...
Primer-BLAST:NCBI的引物设计和特异性检验工具 Primer-BLAST:NCBI的引物设计和特异性检验工具 上传者:michelle_zhonglei时间:2013-01-25 blast-2.2.26-x64-win64.rar blast-2.2.26 windows版,NCBI,用于蛋白质序列比对的软件,非blast+,windows系统中使用。
The sample also demonstrates how to submit a job using the HPC Job Scheduler’s REST API and how to upload and download files from Windows Azure blob and table storage.Overview The National Center for Biotechnology Information’s Basic Local Alignment Search Tool (NCBI BLAST) HPC Sample ...
1) Download the database that you want to blast against, for example theNTdatabase from NCBI. If you want to use a local database, store all the sequences in a text file. The file provided by NCBI is a zipped (nt.gz) file so you have to unzip it. 2) At the DOS prompt (whic...
先了解BLAST Databases:BLAST FTP Site 如何下载NCBI blast数据库? NCBI提供了一个非常智能化的脚本update_blastdb.pl来自动下载所有blast数据库。 脚本使用方法: perlupdate_blastdb.pl nr 有哪些可供下载的blast数据库? perlupdate_blastdb.pl --showall ...
BLAST[6]queries against it, by usingNCBI Mass Sequence Downloader, it is possible to download only the sequences of theFagales(plants) order andSordariomycetidae(fungus) subclass, and run the required BLAST queries against the resulting files. This would considerably reduce both download and ...
## Extend the example to query against the Protein Data Bank ## Time needed to complete this section: <10 minutes ## Confirm query ls queries/P01349.fsa ## Download Protein Data Bank amino acid database (pdbaa) docker run --rm \ -v $HOME/blastdb:/blast/blastdb:rw \ -w /blast/...