Log foldchange (avg_logFC) was calculated as the arithmetic mean of ln cpm values of one population minus the arithmetic mean of ln cpm values of the other populations. P value (p_val) was calculated by the Wilcoxon rank-sum test. Statistical tests were two-sided. Sample size for each ...
The minus and plus signs refer to significant tests (Dunnett q < 0.01) that overcome specific thresholds of fold increase (incr.) or decrease (decr.). Full size image To test whether these associations are at least partially due to a direct effect of coffee on L. asaccharolyticus,...
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