clustalx (clustalx.exe). Clustal X is a windows interface for the ClustalW multiple sequence alignment program.
ClustalX multiple sequence alignment of the mature protein sequence (excluding the signal peptide) of TFPDs from platyhelminthes, CD59 and Ly6.Leonardo, P. FariasGreice, KrautzPetersonCibele, A. TararamBogar, O. AraujoMontoyaTatiana, R. Fraga...
Multiple sequence alignment with Clustal X. Trends Biochem Sci. 1998 Oct;23(10):403-5. Historical Article; Research Support, Non-U.S. Gov't F Jeanmougin,JD Thompson,M Gouy,... - 《Trends in Biochemical Sciences》 被引量: 6100发表: 1998年 Multiple sequence alignment with the Clustal ...
MultiplesequencealignmentwiththeClustal seriesofprograms RamuChenna,HideakiSugawara 1 ,TadashiKoike 1 ,RodrigoLopez 2 ,TobyJ.Gibson, DesmondG.Higgins 3 andJulieD.Thompson 4, * EuropeanMolecularBiologyLaboratory,Meyerhofstrasse1,D-69117Heidelberg,Germany, 1 CenterforInformation BiologyandDNADataBankofJapan,...
The commonly used multiple sequence alignment programs are still limited in their ability to handle very large amounts of sequences because the system lacks a scalable high-performance computing (HPC) environment with a greatly extended data storage capacity. Results We designed ClustalXeed, a ...
众多MSA软件如PASTA（2014）、HAlign（2015）和MAFFT（2002-2013）引领着技术的发展，MAFFT支持并行和GPU计算，表现出色；ClustalW虽然提供可视化，但处理大规模数据的能力有所局限。KAlign虽然号称能处理大数据，但实际效果一般；Muscle则早期专注于蛋白质序列的比对。值得注意的是，尽管动态规划是MSA的主流，但...
Clustal format files contain the word clustal at the beginning. Sequences can be interleaved, (as in the example below) or sequential. (note: the multiple sequence alignment program Clustalw (and clustalx) produce clustal format files by default, but you can specify in "output format options"...
Multiple sequence alignment with the Clustal series of programs:(多序列比对的Clustal系列项目).pdf,Nucleic Acids Research, 2003, Vol. 31, No. 13 3497–3500 DOI: 10.1093/nar/gkg500 Multiple sequence alignment with the Clustal series of programs 1 1 Ramu
clustal w (1.7) multiple sequence alignment 下载积分: 5000 内容提示: CLUSTAL W (1. 7) multiple sequence alignment AC022838. FLK --- AL079307. FLK --- AP002768. FLK --- AC002523. FLK ---
不难看出,虽然T-coffee与clustalx,找到的结果较多,MUSCLE结果较少,但与标准比对结果相比较,MUSCLE特异性好,找到的位点较为准确。 3.Search the Pfam database for nac family, and download the alignment of seed sequences in Stockholm format, use hmmbuild to build a HMM from those sequences, then use...