The R code below creates a box plot, a dot plot, a violin plot and a strip chart (jitter plot) : library(ggplot2) # Create a box plot bp <- ggplot(df, aes(x=dose, y=len, color=dose)) + geom_boxplot() + theme(legend.position = "none") # Create a dot plot # Add the ...
Example 1: Sort Data Frame by Multiple Columns with Base R (order Function) In the first example, we’ll sort our data frame based on theorder()and thewith() functions. The two functions are already available in Base R: data[with(data, order(x2, x3)),]# Order data with Base R ...
The remaining participants were classified into the moderate-risk group. All statistical analyses were performed by using R (4.3.2) with standard data analysis packages and the ggplot2 package for visualization. Confidence intervals were estimated by the Wilson method using R (4.3.2) [26]....
The plot was rendered using defaults from the ggplot2 library. The y-axis has a logarithmic scale. g Bar plot showing the integration density of HIV in super-enhancers located in different 3D sub-compartments. h Bar plot showing the contribution of different predictors to the HIV-1 insertion ...
The top ten terms of each category are shown by bar chart (Figure 3(a)). In total, 172 KEGG pathways were identified. The MAPK signaling pathway and PI3K-Akt signaling pathway were two major pathways with the highest gene ratios and the lowestPvalues; therefore, they might play important ...
(LT) products.cBar chart representing the amount of monomeric and dimeric 1,6-anhydro-NAM-containing products released in reactions containing the indicated proteins. Bars represent the mean (± SD) of three independent experiments. Data were normalized to those obtained for Slt. Asterisks indicate...
Figure10A again sets out the ethnic trends and the bar chart in Panel B shows the relative rises in each of the four groups. Fig. 10 Testicular cancer rates derived from state data by selected ethnicity. (A) Over time. (B) Rises across periods ...
> 1 and adj.P-value <0.05 as statistically difference. Upregulated genes were defined as those with a log FC value >1 and downregulated genes were identified by log FC value < −1. The visualization of DEGs was achieved using the volcano plot via the ggplot2 package in R ...
Table 1 Demographic and routine laboratory data of patients and healthy controls (HC) included in the study Full size table Fig. 1 AOutline of the study, including the number of participants and quantified cytokines.B-HStacked bar chart and box-and-whisker plots showing demographic parameters for...
(J) Bar chart indicating clonal space homeostasis within each TCE patient sample analyzed at the indicated time points. Relative abundance of clones shown. Frequency cut points: small = [0;0.001], medium = [0.001;0.01], large = [0.01;1]. (K) Gini index of TCR clonal space in RRMM pati...