Therefore, eLD enables estimation of-regional LD of SNP genotypes at two unlinked loci, such as the nonlinear LD between functional missense variants of(rs1229984 [Arg47His]) and(rs671 [Glu504Lys]).doi:10.1038/s41439-018-0030-xOkada, Yukinori...
4d). After removing the effects of the leading SNP, the positive association of the TR variation with gene expression was still significant. OsPRR1 is a member of the pseudo-response regulator (PRR) gene family. Other members of the same gene family, such as OsPRR37 and OsPRR59, are ...
However, most packages are intended for use with single-nucleotide polymorphism (SNP) data in a pairwise fashion. This focus on biallelic markers makes both LD estimation and graphical representation straightforward compared with multiallelic markers such as microsatellites. The analysis of LD between a...