pentosaceus pputida psalmonis ranatipestifer rhodococcus sagalactiae saureus sbsec scanis sdysgalactiae senterica sepidermidis sgallolyticus shaemolyticus shominis sinorhizobium slugdunensis smaltophilia soralis spneumoniae spseudintermedius spyogenes ssuis sthermophilus sthermophilus_2 streptomyces suberis s...
(41) % mlst --nopath /opt/data/refseq/S_pyogenes/*.fna NC_018936.fna spyogenes 28 gki(4) gtr(3) murI(4) mutS(4) recP(4) xpt(2) yqiL(4) NC_017596.fna spyogenes 11 gki(2) gtr(6) murI(1) mutS(2) recP(2) xpt(2) yqiL(2) NC_008022.fna spyogenes 55 gki(11) gtr(...
dysgalactiae subspecies equisimilis,S. pneumonia,S. pyogenes and S. suis,including the amount of housekeeping genes,primer sequences and the size of PCR products.Zhang YingShandongMa LiShandongWang JianjunShandongZhang ZhimeiShandongYang LimeiShandongShen ZhiqiangShandongAnimal Husbandry and Feed Science...
smaltophilia spneumoniae spseudintermedius spyogenes ssuis staphlugdunensis sthermophilus streptomyces streptothermophilus suberis szooepidemicus taylorella tenacibaculum tpallidum ureaplasma vcholerae vcholerae_2 vibrio vparahaemolyticus vtapetis vvulnificus wolbachia xfastidiosa ypseudotuberc...
The approach is termed mini-MLST or Minim typing and it has previously been applied to Streptococcus pyogenes, Staphylococcus aureus and Enterococcus faecium. Six SNPs were derived from concatenated MLST sequences on the basis of maximisation of the Simpsons Index of Diversity (D). DNA fragments ...
pyogenes and S. suis,including the amount of housekeeping genes,primer sequences and the size of PCR products.Zhang Ying[1,2][1]Shandong Binzhou Animal Science and Veterinary Medicine AcademyMa Li[1,2][2]Shandong Lvdu Ante Veterinary Drag Co.Wang Jianjun[1,2]Zhang Zhimei[1,2]Yang Limei[...
spneumoniae spseudintermedius spyogenes ssuis staphlugdunensis sthermophilus streptomyces streptothermophilus suberis szooepidemicus taylorella tenacibaculum tpallidum ureaplasma vcholerae vcholerae_2 vibrio vparahaemolyticus vtapetis vvulnificus wolbachia xfastidiosa ``` ## Example Usage ```bash ml...
spneumoniae spseudintermedius spyogenes ssuis staphlugdunensis sthermophilus streptomyces streptothermophilus suberis szooepidemicus taylorella tenacibaculum tpallidum ureaplasma vcholerae vcholerae_2 vibrio vparahaemolyticus vtapetis vvulnificus wolbachia xfastidiosa ...