Name Last commit message Last commit date Latest commit Cannot retrieve latest commit at this time. History 264 Commits .github/workflows test tex .gitignore Dockerfile LICENSE.txt Makefile NEWS.md README.md align.c bseq.c chain.c example.c ...
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.github test tex .gitignore Dockerfile LICENSE.txt Makefile NEWS.md README.md align.c bseq.c chain.c format.c hit.c index.c kalloc.c kalloc.h ketopt.h khashl-km.h kseq.h ksort.h kthread.c kthread.h kvec-km.h main.c map.c miniprot.1 miniprot.h misc.c mppriv.h nasw-...
Conda recipes for the bioconda channel. Contribute to martin-g/bioconda-recipes development by creating an account on GitHub.
// To compile: // gcc -g -O2 example.c libminiprot.a -lz #include <stdlib.h> #include <assert.h> #include <stdio.h> #include <zlib.h> #include "miniprot.h" #include "nasw.h" // needed for CIGAR #include "kseq.h" KSEQ_INIT(gzFile, gzread) int main(int argc, char *argv...
.github test tex .gitignore Dockerfile LICENSE.txt Makefile NEWS.md README.md align.c bseq.c chain.c format.c hit.c index.c kalloc.c kalloc.h ketopt.h khashl-km.h kseq.h ksort.h kthread.c kthread.h kvec-km.h main.c map.c miniprot.1 miniprot.h misc.c mppriv.h nasw-...
FOR CONTRIBUTOR: - I have read the CONTRIBUTING.md document and this tool is appropriate for the tools-iuc repo. - License permits unrestricted use (educational + commercial) - This PR adds a n...
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Miniprot boundary scorer parses introns, starts, stops and exons from miniprot's alignment output and scores them based on local alignment quality - tomasbruna/miniprot-boundary-scorer
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