Additionally there is a beta implementation to compute A matrix when parentage is not deterministic as in a polycross design. See ?AmatrixPolycross. Citation To cite this R package: Citation To cite this R package: Amadeu RR, Garcia AA, Munoz PR, Ferrão LF. AGHmatrix: genetic relationsh...
Fast Pure R Implementation of GEE: Application of the Matrix Package. Generalized estimating equation solvers in R only allow for a few pre-determined options for the link and variance functions. We provide a package, geeM, w... McDaniel,S Lee,Henderson,... - 《R Journal》 被引量: 12...
matrixset.Rproj Updated to roxygen 7.3.2 Jan 4, 2025 README License MIT license matrixset Amatrixsetis a container of matrices (bothmatrixand types fromMatrixpackage), each having the same number of rows and columns and the same dimnames. Moreover, each dimname must uniquely identify element...
The three algorithms in our package use the coherence matrix as an input for phase linking, therefore they analyze the full network of interferograms for each pixel's neighborhood. Following is a summary of each method. 2.2.1 Phase triangulation Assuming that target multitemporal vector of ...
We present an implementation to perform CUR matrix decompositions, in the form of a freely available, open source R-package called rCUR. This package will help users to perform CUR-based analysis on large-scale data, such as those obtained from different high-throughput technologies, in an ...
Principal Component Analysis (PCA) was performed using the DESeq2 package in R. Gene Ontology analysis for DEGs was conducted using DAVID (version 6.8). Heatmap analysis was carried out using the heatmap.2 functions in R. Animals All animal experiments were conducted according to protocols ...
PLS regression methods have been used in applied fields for two decades. Techniques based on iteratively reweighted regression have appeared in the special... JA Gil,R Romera - 《Journal of Chemometrics》 被引量: 27发表: 2015年 加载更多研究点推荐 Matrix-Based Partial Least Squares ...
Matrix Correlation Coefficients [R package MatrixCorrelation version 0.9.2] Given an intractable target density $p$, variational inference (VI) attempts to find the best approximation $q$ from a tractable family $Q$. This is typica... KH Liland 被引量: 0发表: 2016年 Truncating an exact Matri...
R package version 2.18.0. (2020) https://www.bioconductor.org/packages/release/bioc/html/ROntoTools.html. Subramanian, A. et al. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc. Natl Acad. Sci. 102, 15545–15550 (2005). ...
The following R code selects them, computes the matrix of simple correlations, and plots them is a color scheme to show ellipses as well as numbers using the R package “corrplot” by Wei (2013). In the following code, the object “ca” contains the correlation matrix. names(mtcars) ...