'Get GetBasePeak tmpBasePeak = ActiveDocument.SpecView.GetBasePeak(dMass, dIntensity) 'Write 1-PEAKNUMBER most intensive peaks (if has)per PEAKRANGE amu to output list If (nSpecPeak > 0) Then nPeakEnd = nSpecPeak - PeakNumber + 1 ...
Pasting a peak list into the Mass Spectrum view· Copy a peak list into the Windows Clipboard;· In MS Interpreter, click Mass Spectrum Window to activate it;· Click Paste button, or select from the menu: Edit/Paste, or press Ctrl-V....
Sanjib N. Meitei delivered a talk entitled "SimGlycan: Speeding up LC-MS data processing - molecular feature finding, precursor peak picking, and MS/MS spectra annotation - of multiplexed glycomics experiments using Orbitrap-based mass spectrometers" [...] Tags: Society for Glycobiology (SFG) ...
Isotope Distribution Calculator and Mass Spec Plotter Find the mass intensity data of isotopes here. Use our mass spectrometry plotter and isotope calculator to find isotopic distribution of a given chemical formula. Mass Spectrum Generator Plot a mass spectrum given a list of peak masses and intensi...
In addition to being a function of the cleanliness of ion optics and source–analyzer transfer capillary, age of the electron multiplier, etc., absolute peak intensities and charge distributions are critically dependent on the relative position of the inner, fused-silica analyte needle (a con- ...
All these results obtained starting from the peak list generated by MassSpec are not worse than those obtained in the literature applying other feature extraction algorithms on the same dataset [27, 42]. The main advantage of using the peak list instead of other data mining techniques to ...
Usually, analyte is spiked at low and high concentrations along with internal standard into a matrix extract that has been processed using the full sample preparation procedure and then determining the absolute and internal standard normalized peak responses relative to the responses in solvent (61)....
Intra-sample and inter-sample peaks matching were performed on peak lists to realize supervised principal component analysis (PCA). For hierarchical clustering, spectra were aligned and peak lists were exported to the Perseus software (www.perseus-framework.org; v. 1.5.0.31). The annotated matrices...
Mascot cannot interpret raw mass spectra itself and must be given a peak list to work with. Different mass spectrometer manufacturers use different software to do this but the output is all generally similar.Leonard J. FosterMatthias Mann
Base peak chromatograms (BPCs) and total ion chromatograms (TICs) have three columns, making them super-simple to plot with either base R or the popular ggplot2 library: knitr::kable(head(msdata$BPC, 3)) rtintfilename 4.009000 11141859 LB12HL_AB.mzML.gz 4.024533 9982309 LB12HL_AB.mzML...