|| 一鍵取得MA plot、volcano plot等多項互動美圖 || 在設定好各類參數後,點擊"Filter with setting Parameter " 就能得到互動圖! MA plot MA plot 展示兩組間 "基因表現量" 和 "Fold change" 的分佈, 圖的X軸為平均基因表現量 (Mean normalized count),Y軸為Fold change,紅色點表示 |Fold change| >2(...
MA and Volcano plots from data present in a limma derived topTableRaffaele A Calogero
This MATLAB function creates a scatter plot of gene expression data, plotting significance versus fold change of gene expression ratios of two data sets, DataX and DataY.
Loess is a method of local regression that is based on MA plot, which normalizes the data by subtracting the difference between the arrays from the average mean difference across arrays (Cleveland and Devlin, 1988; From: Leveraging Biomedical and Healthcare Data, 2019 ...
mavolcanoplot(DataX, DataY, PValues)creates a scatter plot of gene expression data, plotting significance versus fold change of gene expression ratios of two data sets,DataXandDataY. It plots significance as the –log10(p-value) from the input,PValues.DataXandDataYcan be vectors, matrices...
The calibration plot demonstrated that the nomogram can effectively forecast the actual survival outcomes (Figure 9(h)). Moreover, the DCA curve and time-ROC analysis demonstrated that the nomogram and risk signature had better prognostic capacity than other clinicopathological features, as shown in ...
Fig. 13. A plot of Th/Yb vs Nb/Yb (after Pearce, 2008) for basalts and basalt-derived volcaniclastic-sedimentary rocks which form Package B. Abbreviations: E-MORB, enriched mid-ocean ridge basalt; N‑MORB, normal mid-ocean ridge basalt; OIB, ocean island basalt; PM, primitive mantle....
indices for the different constant ratios of compound vs.doxorubicin were determined by using the CompuSyn software to plot four to five data points to each ratio. CI values were calculated by means of the median-effect equation [10], where CI < 1, CI = 1, and CI > 1 represent synergism...
A theoretical crystallization vector can be drawn for each plot and each lithological unit, allowing the identification of uncorrelated, altered samples (Pearce 2014b). It is important to note that ultramafic rocks cannot be considered in the crystallization vector because they do not have a liquid...
Th) vs. (238U)/(232Th) for >0.4 Ma reference zircons both using 5 ppm and 2.5 ppm corrections, which indicates that both corrections plot >0.4 Ma zircons nearly along the equiline, while the (230Th/238U) for 2.5 ppm correction is slightly above unity....