The software includes a number of conversion utilities allowing to process data from a variety of input sources and to output the data in commonly used assembly formats. Celera assembler Identifies allelic variation given a Whole Genome Shotgun (WGS) assembly of haploid sequences. Celera ...
A curated list of awesome Bioinformatics software, resources, and libraries. [List] Awesome Bioinformatics Benchmarks A curated list of bioinformatics benchmarking papers and resources. [Tutorial] bioinformatics Path to a free self-taught education in Bioinformatics (mainly curriculums). [Code Collection...
When looking for a bioinformatics tool for a specific application: OmicTools:http://omictools.com/ GitXiv:http://www.gitxiv.com/?cat[0]=bioinformatics Bio.Tools:https://bio.tools/ Biosharing:https://biosharing.org https://github.com/Dongwon-Lee/lsgkm/ Fast BWT creation:https://github.co...
Awesome-Bioinformatics –Open-source bioinformatics software and libraries. awesome-biological-image-analysis –Image analysis in biology. awesome-bitclout –BitClout blockchain social network. awesome-bitcoin –Bitcoin services and tools for software developers. awesome-bitcoin-payment-processors –Bitcoin paym...
Circular logos: http://bioinformaticstools.mayo.edu/circularlogo/index.html Convert kernels learned by CNN to PWMs: ftp://ftp.cbi.pku.edu.cn/pub/software/CBI/k2p CRBM: https://github.com/schulter/crbm YAMDA: https://github.com/daquang/YAMDA Clustering of peaks: https://github.com/Ba...
Healthcare and Biomedical Engineering:MATLAB is used for medical image analysis, bioinformatics, and modeling biological systems. MATLAB's versatility, extensive libraries, and user-friendly environment make it a powerful tool for researchers, engineers, scientists, and professionals across a wide range ...
GNUMAPGNUMAPperforms alignment using a probabilisticNeedleman-Wunschalgorithm. This tool is able to handle alignment in repetitive regions of a genome without losing information. The output of the program was developed to make possible easy visualization using available software. ...
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